DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srpk79D and Srpk2

DIOPT Version :9

Sequence 1:NP_001246881.1 Gene:Srpk79D / 40461 FlyBaseID:FBgn0025702 Length:1018 Species:Drosophila melanogaster
Sequence 2:XP_011248053.1 Gene:Srpk2 / 20817 MGIID:1201408 Length:750 Species:Mus musculus


Alignment Length:805 Identity:296/805 - (36%)
Similarity:407/805 - (50%) Gaps:156/805 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 LSLSLSPPLNRRRDMPALRGPFV-SLSEPRGTLSTTDEIYPDSSDSSLYVSDEEQEDASQYCRGG 333
            :|::.....:..|..|..:.|.| ....|.......|...|:..:..|...||||||.:.||:||
Mouse    38 MSVNSEKSSSSERPEPQQKAPLVPPPPPPPPPPPLPDPAPPEPEEEILGSDDEEQEDPADYCKGG 102

  Fly   334 YHPVVIGDIFDNRFRVVRKLGWGHFSTVWLCRDLKDEKYVALKVVKSAPHYIETAADEIRLLEAI 398
            ||||.|||:|:.|:.|:||||||||||||||.|::.:::||:||||||.||.|||.|||:||:.:
Mouse   103 YHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCV 167

  Fly   399 RDADPMDVKRERIVRLMNHFTVRGVNGMHTCLVFEALGCSLYKLIVKNNYQGLAIAQVRNIIRQV 463
            |::||.|..::.:|:|::.|.:.|:||:|.|:|||.||..|.|.|:|:|||||.:..|::|||||
Mouse   168 RESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQV 232

  Fly   464 LEGLDYLHSKCSIIHTDIKPENILLVIDNAAAMNQQIDDEINSLRVKGVDFPDSYISSIEKQTKS 528
            |:|||||||||.||||||||||||:.:|:|..  :::..|....:..|...|.....|...|.| 
Mouse   233 LQGLDYLHSKCKIIHTDIKPENILMCVDDAYV--RRMAAEATEWQKAGAPPPSGSAVSTAPQQK- 294

  Fly   529 RAKWPLIEPNGSTNTNTNTSNSTATNSNSSTPLAAVIMSTLD--KEDTTTTTSSTLNSNTTSSLA 591
                    |.|..:.|............     |.::...|.  :|.........|..|.||:.|
Mouse   295 --------PIGKISKNKKKKLKKKQKRQ-----AELLEKRLQEIEELEREAERKILEENITSAEA 346

  Fly   592 SKYSSLLGDSECNGGLGGSANINNRYRTEKKITAKSSGDCDEDAESDTLGEQSTLASTMDSPTDL 656
            |      |:.:           :..|:.|  :|.|:: |.::..|.:|..:...:.         
Mouse   347 S------GEQQ-----------DGEYQPE--VTLKAA-DLEDTTEEETAKDNGEVE--------- 382

  Fly   657 DPEPELDSKPNTVPEPSEGPIPEQPTPNSTNSSCPSHNTATIAKSKINSNILSTCTSL------T 715
            |.|.:.|::.... |..|..: ||...|.        :...:...|.|.:|.:...||      .
Mouse   383 DQEEKEDAEKENA-EKDEDDV-EQELANL--------DPTWVESPKANGHIENGPFSLEQQLEDE 437

  Fly   716 STNEYCFTNTNTTTASTPSAPPSATPSSAPALASATPPSTCTPSFTQIAPSATAPATSTTCTTSA 780
            ..:|....|........|:|....|.||               |:.|.               :.
Mouse   438 EDDEDDCANPEEYNLDEPNAESDYTYSS---------------SYEQF---------------NG 472

  Fly   781 EFYDGDHKTTSTSTTTTSNAISSATTTTATTTTAIAKLNVHANAIPSQNQSQSSQNNTYTIQS-- 843
            |..:|.|||:...|...|..:.         ..|...:....:.:..|.:|..|.:.:.|:.:  
Mouse   473 ELPNGQHKTSEFPTPLFSGPLE---------PVACGSVISEGSPLTEQEESSPSHDRSRTVSASS 528

  Fly   844 -------------LIDN-------SNVRVKIADLGNACYDYHHFTEDIQTRQYRSIEVLLGAPYN 888
                         |:.|       ..:|||||||||||:.:.|||||||||||||||||:||.|:
Mouse   529 TGDLPKTKTRAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYS 593

  Fly   889 YTADIWSTACLAFELATGDYLFDPHAGESYSRDEDHLAHIVELLGSIPQ---------------- 937
            ..||||||||:|||||||||||:||:||.|||||||:|||:|||||||:                
Mouse   594 TPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRR 658

  Fly   938 ---SVIFR------------GKHGLKYFTSYGSLRNITKLKPWSLMNVLVEKYDWDPVEAKKFSD 987
               ::|..            ||:..::||..|.||:|||||||||.:||||||.|...:|.:|:|
Mouse   659 DHIALIIELLGKVPRKYAMLGKYSKEFFTRKGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTD 723

  Fly   988 FLLPMLEYNPVIRASAAECLQHPWL 1012
            ||:||||..|..||||.|||:||||
Mouse   724 FLIPMLEMVPEKRASAGECLRHPWL 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Srpk79DNP_001246881.1 STKc_SRPK 336..>504 CDD:271038 97/167 (58%)
S_TKc 347..>492 CDD:214567 88/144 (61%)
STKc_SRPK <844..1012 CDD:271038 116/205 (57%)
Srpk2XP_011248053.1 STKc_SRPK2 103..>291 CDD:271119 103/189 (54%)
2A1904 <338..418 CDD:273344 21/118 (18%)
PKc_like <537..748 CDD:389743 116/210 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1290
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100556
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.770

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