DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srpk79D and srpk2

DIOPT Version :9

Sequence 1:NP_001246881.1 Gene:Srpk79D / 40461 FlyBaseID:FBgn0025702 Length:1018 Species:Drosophila melanogaster
Sequence 2:NP_001096257.1 Gene:srpk2 / 100124819 XenbaseID:XB-GENE-990797 Length:637 Species:Xenopus tropicalis


Alignment Length:748 Identity:275/748 - (36%)
Similarity:379/748 - (50%) Gaps:158/748 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 SLSLSP--PLNRRRDMPALRG----PFVSLSEPRGTLSTTDEIYPDSSDSSLYVSDEEQEDASQY 329
            ||...|  |.:..:|:|...|    |...:..|.|.|.:               .:|||||...|
 Frog    40 SLDSQPGLPEHSLQDVPLSPGPPPTPPTPVLPPPGPLGS---------------DNEEQEDPGDY 89

  Fly   330 CRGGYHPVVIGDIFDNRFRVVRKLGWGHFSTVWLCRDLKDEKYVALKVVKSAPHYIETAADEIRL 394
            |||||:||.|||:|:.|:.||||||||||||||||.||:.:::|||||||||.||.|||.|||:|
 Frog    90 CRGGYYPVKIGDLFNGRYHVVRKLGWGHFSTVWLCWDLQRKRFVALKVVKSAVHYTETALDEIKL 154

  Fly   395 LEAIRDADPMDVKRERIVRLMNHFTVRGVNGMHTCLVFEALGCSLYKLIVKNNYQGLAIAQVRNI 459
            |:.:||:||.|.|||.||:|::.|.:.||||:|.|:|.|.||..|.|.|:|:||:|:.:..|::|
 Frog   155 LKCVRDSDPSDSKREMIVQLIDDFKISGVNGVHICMVLEVLGHQLLKWIIKSNYEGVPLPCVKSI 219

  Fly   460 IRQVLEGLDYLHSKCSIIHTDIKPENILLVIDNAAAMNQQIDDEINSLRVKGVDFPDSYISSIEK 524
            :||||:||||||:||.||||||||||||:.::                        :.||..:..
 Frog   220 LRQVLQGLDYLHTKCKIIHTDIKPENILMCVE------------------------EGYIRRLAA 260

  Fly   525 QTKSRAKWPLIEPNGSTNTNTNTSNSTATNSNSSTPLAAVIMSTLDKEDTTTTTSSTLNSNTTSS 589
            :.....:..:..|:||.     .|::..::.|.:..::......|.::          .......
 Frog   261 EATIWQQSGMPPPSGSA-----VSSAPPSHQNLNGKVSKNKKKKLKRQ----------QKRQQKL 310

  Fly   590 LASKYSSLLGDSECNGGLGGSANINNRYRTEKKITAKSSGDCDEDAESDTLGEQSTLASTMDSPT 654
            |..:...:....|..|| ....||.:.              |:........|:||:..:.:.|  
 Frog   311 LEERLRDIHNMEELGGG-DSCPNIQHH--------------CNPGNHEQHWGQQSSQETAVKS-- 358

  Fly   655 DLDPEPELDSKPNTVPEPSEGPIPEQPTPNSTNSSCPSHNTATIAKSKINSNILSTCTSLTSTNE 719
                    :|....:..|......:|   ...:||..|..|..:|:|..::.:..:|      |.
 Frog   359 --------ESTSQLISNPISSTTGDQ---ECADSSLGSGGTTCLAQSPQSTGLYKSC------NG 406

  Fly   720 YCFTNTNTTTASTPSAPPSATPSSAPALASATPPSTCTPSFTQIAPSATAPATSTTCTTSAEFYD 784
            |                .|.|..|:        |.|.|..|:..|.||          ||.....
 Frog   407 Y----------------SSGTRGSS--------PDTHTSGFSSSALSA----------TSGSAIS 437

  Fly   785 GDHKTTSTSTTTTSNAISSATTTTATTTTAIAKLNVHANAIPSQNQSQSSQNNTYTIQSLIDNSN 849
            |...........:.|.:..|.             :...|.:..||..:                 
 Frog   438 GYSGVRGRGGILSPNLLFCAA-------------DFLVNPLDPQNADK----------------- 472

  Fly   850 VRVKIADLGNACYDYHHFTEDIQTRQYRSIEVLLGAPYNYTADIWSTACLAFELATGDYLFDPHA 914
            ::||||||||||:.:.||||||||||||::|||:||.|...||||||||:|||||||||||:||:
 Frog   473 IQVKIADLGNACWVHKHFTEDIQTRQYRALEVLIGAGYGTPADIWSTACMAFELATGDYLFEPHS 537

  Fly   915 GESYSRDEDHLAHIVELLGSIPQSVIFRGKHGLKYFTSYGSLRNITKLKPWSLMNVLVEKYDWDP 979
            ||.|:|||||:|||:||||.||......|::..:||:..|.||:|..||.|.|.:||||||:|..
 Frog   538 GEDYTRDEDHIAHIIELLGDIPPHFALSGRYSREYFSRRGELRHIQNLKHWGLFDVLVEKYEWSL 602

  Fly   980 VEAKKFSDFLLPMLEYNPVIRASAAECLQHPWL 1012
            .||.:|:|||:||||:.|..||:|::|||||||
 Frog   603 EEATQFTDFLMPMLEFLPEKRATASQCLQHPWL 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Srpk79DNP_001246881.1 STKc_SRPK 336..>504 CDD:271038 99/167 (59%)
S_TKc 347..>492 CDD:214567 92/144 (64%)
STKc_SRPK <844..1012 CDD:271038 103/167 (62%)
srpk2NP_001096257.1 STKc_SRPK3 96..635 CDD:271120 251/675 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D290680at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm49010
Panther 1 1.100 - - LDO PTHR24055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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