DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csp and JJJ2

DIOPT Version :9

Sequence 1:NP_001287144.1 Gene:Csp / 40459 FlyBaseID:FBgn0004179 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_012373.2 Gene:JJJ2 / 853277 SGDID:S000003698 Length:583 Species:Saccharomyces cerevisiae


Alignment Length:76 Identity:29/76 - (38%)
Similarity:42/76 - (55%) Gaps:8/76 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PGMDKRKLSTSGDSLYEILGLPKTATGDDIKKTYRKLALKYHPDKNPDNVDAADKFKEVNRAHSI 68
            |.:|:       .:.|.||||...||..::.|:|.|||...||||...: .:.:.||.|..||||
Yeast     7 PQLDR-------TTYYSILGLTSNATSSEVHKSYLKLARLLHPDKTKSD-KSEELFKAVVHAHSI 63

  Fly    69 LSDQTKRNIYD 79
            |:|:.::..||
Yeast    64 LTDEDQKLRYD 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CspNP_001287144.1 DnaJ 17..>86 CDD:223560 27/63 (43%)
DnaJ 17..79 CDD:278647 25/61 (41%)
JJJ2NP_012373.2 DnaJ 13..74 CDD:395170 25/61 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
10.960

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