DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csp and AT1G80030

DIOPT Version :9

Sequence 1:NP_001287144.1 Gene:Csp / 40459 FlyBaseID:FBgn0004179 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_565227.1 Gene:AT1G80030 / 844343 AraportID:AT1G80030 Length:500 Species:Arabidopsis thaliana


Alignment Length:90 Identity:40/90 - (44%)
Similarity:56/90 - (62%) Gaps:7/90 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAPGMDKRKLS-----TSGDSLYEILGLPKTATGDDIKKTYRKLALKYHPDKNPDNVDAADKFKE 61
            |.|..::|..|     |||| .|..||:.|:|...:||..||:||.:||||.|.: ..|.:||||
plant    56 STPYRNRRGRSLVVFATSGD-YYATLGVSKSANNKEIKAAYRRLARQYHPDVNKE-PGATEKFKE 118

  Fly    62 VNRAHSILSDQTKRNIYDNYGSLGL 86
            ::.|:.:|||:.||.:||.||..|:
plant   119 ISAAYEVLSDEQKRALYDQYGEAGV 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CspNP_001287144.1 DnaJ 17..>86 CDD:223560 31/68 (46%)
DnaJ 17..79 CDD:278647 27/61 (44%)
AT1G80030NP_565227.1 PRK14293 74..436 CDD:237663 34/72 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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