DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csp and dnajc12

DIOPT Version :9

Sequence 1:NP_001287144.1 Gene:Csp / 40459 FlyBaseID:FBgn0004179 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001314717.1 Gene:dnajc12 / 797196 ZFINID:ZDB-GENE-070801-3 Length:165 Species:Danio rerio


Alignment Length:101 Identity:34/101 - (33%)
Similarity:54/101 - (53%) Gaps:12/101 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DSLYEILGLPKTATGDDIKKTYRKLALKYHPDKNPDNVDAADKFKEVNRAHSILSDQTKRNIYDN 80
            :..|.:||..:.:|.:.|...::..||..||||:|:|..|.::|:::..|..:|:|:.||..|| 
Zfish    13 EDYYGLLGCDELSTTEQIVNEFKVKALACHPDKHPENPKAVEQFQKLQEAKEVLTDEKKRKSYD- 76

  Fly    81 YGSLGLYIAEQ----FGEENVNAYFVVTSP--AVKA 110
                 |::..|    |||....:..|.||.  ||||
Zfish    77 -----LWLRSQIKIPFGEWRALSDSVKTSMHWAVKA 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CspNP_001287144.1 DnaJ 17..>86 CDD:223560 22/68 (32%)
DnaJ 17..79 CDD:278647 20/61 (33%)
dnajc12NP_001314717.1 DnaJ 14..76 CDD:278647 20/61 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592381
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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