DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Csp and dnj-13

DIOPT Version :9

Sequence 1:NP_001287144.1 Gene:Csp / 40459 FlyBaseID:FBgn0004179 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001366737.1 Gene:dnj-13 / 3564910 WormBaseID:WBGene00001031 Length:331 Species:Caenorhabditis elegans


Alignment Length:72 Identity:39/72 - (54%)
Similarity:51/72 - (70%) Gaps:1/72 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GDSLYEILGLPKTATGDDIKKTYRKLALKYHPDKNPDNVDAADKFKEVNRAHSILSDQTKRNIYD 79
            |...|::||:.|.||.|:|||.|||:|||||||||.: ..|.:||||:..|:.:|||..|:.|||
 Worm     2 GKDYYKVLGISKGATDDEIKKAYRKMALKYHPDKNKE-AGAENKFKEIAEAYDVLSDDKKKKIYD 65

  Fly    80 NYGSLGL 86
            .:|..||
 Worm    66 QFGEEGL 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CspNP_001287144.1 DnaJ 17..>86 CDD:223560 36/68 (53%)
DnaJ 17..79 CDD:278647 33/61 (54%)
dnj-13NP_001366737.1 DnaJ 1..331 CDD:223560 39/72 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.