DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csp and Dnajb4

DIOPT Version :9

Sequence 1:NP_001287144.1 Gene:Csp / 40459 FlyBaseID:FBgn0004179 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001013094.1 Gene:Dnajb4 / 295549 RGDID:1305826 Length:337 Species:Rattus norvegicus


Alignment Length:72 Identity:41/72 - (56%)
Similarity:49/72 - (68%) Gaps:1/72 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GDSLYEILGLPKTATGDDIKKTYRKLALKYHPDKNPDNVDAADKFKEVNRAHSILSDQTKRNIYD 79
            |...|.|||:.|.||.:||||.|||.|||:||||| .:..|.:|||||..|:.:|||..||.|||
  Rat     2 GKDYYHILGIEKGATDEDIKKAYRKQALKFHPDKN-KSPQAEEKFKEVAEAYEVLSDPKKREIYD 65

  Fly    80 NYGSLGL 86
            .:|..||
  Rat    66 QFGEEGL 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CspNP_001287144.1 DnaJ 17..>86 CDD:223560 38/68 (56%)
DnaJ 17..79 CDD:278647 35/61 (57%)
Dnajb4NP_001013094.1 DnaJ 1..332 CDD:223560 41/72 (57%)
DnaJ 4..65 CDD:278647 35/61 (57%)
DnaJ_C 158..320 CDD:199909
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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