DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csp and SPBC3E7.11c

DIOPT Version :9

Sequence 1:NP_001287144.1 Gene:Csp / 40459 FlyBaseID:FBgn0004179 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_596098.1 Gene:SPBC3E7.11c / 2540676 PomBaseID:SPBC3E7.11c Length:355 Species:Schizosaccharomyces pombe


Alignment Length:117 Identity:39/117 - (33%)
Similarity:59/117 - (50%) Gaps:24/117 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 YEILGLPKTATGDDIKKTYRKLALKYHPDKNPDNVDAA-DKFKEVNRAHSILSDQTKRNIYDNYG 82
            |:||.:...|.||.|||:||:||:.||||||.:|.:|| :||:::..|:.:|||...|..||..|
pombe    11 YDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVLSDPKLREKYDKLG 75

  Fly    83 SLGL-----------YIAEQFGEENVNAY------------FVVTSPAVKAV 111
            .:|.           :....||.::...|            .:...|.:||:
pombe    76 KVGAVPDAGFEDAFEFFKNLFGGDSFRDYVGELNLLKELCKMINEEPELKAI 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CspNP_001287144.1 DnaJ 17..>86 CDD:223560 32/67 (48%)
DnaJ 17..79 CDD:278647 29/60 (48%)
SPBC3E7.11cNP_596098.1 DnaJ 8..>102 CDD:223560 35/90 (39%)
DnaJ 9..72 CDD:278647 29/60 (48%)
DnaJ-X 150..350 CDD:291006
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
10.960

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