DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csp and dnj-16

DIOPT Version :9

Sequence 1:NP_001287144.1 Gene:Csp / 40459 FlyBaseID:FBgn0004179 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001254890.1 Gene:dnj-16 / 175540 WormBaseID:WBGene00001034 Length:395 Species:Caenorhabditis elegans


Alignment Length:80 Identity:38/80 - (47%)
Similarity:53/80 - (66%) Gaps:7/80 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KLSTSGD-------SLYEILGLPKTATGDDIKKTYRKLALKYHPDKNPDNVDAADKFKEVNRAHS 67
            |.:|.||       ..|::||:.|.|:..:||..|||||||||||:||::..|.::||:|:.|:|
 Worm    20 KATTPGDQPKVSEMDFYQLLGVEKMASEAEIKSAYRKLALKYHPDRNPNDAHAQEEFKKVSIAYS 84

  Fly    68 ILSDQTKRNIYDNYG 82
            :|||..||..||..|
 Worm    85 VLSDPNKRRQYDVSG 99

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CspNP_001287144.1 DnaJ 17..>86 CDD:223560 34/66 (52%)
DnaJ 17..79 CDD:278647 31/61 (51%)
dnj-16NP_001254890.1 DnaJ 30..>127 CDD:223560 34/70 (49%)
PLN02281 297..>370 CDD:177920
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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