DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Csp and dnj-8

DIOPT Version :9

Sequence 1:NP_001287144.1 Gene:Csp / 40459 FlyBaseID:FBgn0004179 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001040753.1 Gene:dnj-8 / 174093 WormBaseID:WBGene00001026 Length:813 Species:Caenorhabditis elegans


Alignment Length:78 Identity:28/78 - (35%)
Similarity:48/78 - (61%) Gaps:4/78 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 YEILGLPKTATGDDIKKTYRKLALKYHPDKNPDNVDAADKFKEVNRAHSILSDQTKRNIYDNYGS 83
            |::||:.:.|:..:||..|:.||.::||||..|.. |:.:|.|:..|:.:|||..::..||.:|:
 Worm    24 YKVLGISRRASAKEIKSAYKSLAREWHPDKRKDEA-ASGRFMEIAEAYEVLSDPLRKERYDRFGT 87

  Fly    84 LGLYIAEQFGEEN 96
            ..  ..:|| |:|
 Worm    88 FD--DVKQF-EDN 97

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CspNP_001287144.1 DnaJ 17..>86 CDD:223560 24/66 (36%)
DnaJ 17..79 CDD:278647 21/59 (36%)
dnj-8NP_001040753.1 DnaJ_bact 22..>86 CDD:274090 23/62 (37%)
TRX_DnaJ 118..229 CDD:239261
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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