DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddx1 and Dbp45A

DIOPT Version :10

Sequence 1:NP_524212.2 Gene:Ddx1 / 40457 FlyBaseID:FBgn0015075 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_476927.1 Gene:Dbp45A / 35917 FlyBaseID:FBgn0010220 Length:521 Species:Drosophila melanogaster


Alignment Length:457 Identity:122/457 - (26%)
Similarity:190/457 - (41%) Gaps:118/457 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 GNGFVGACQAGPEHSKANPITGPAAGAPSAKPAPNAPQAIIMEPSRELAEQTYNQIEKFKYHLSN 315
            |...:||.:.|  ..|......|.....|.:|..:.  |:::.|:.|||   |...|:|......
  Fly    44 GQDCIGAAKTG--SGKTFAFALPILERLSEEPVSHF--ALVLTPTHELA---YQISEQFLVAGQA 101

  Fly   316 PEVRSLLLIGGVRLEEQKAQLMQGTHIVVGTPGRLEEMINSGLVLLTHC--------RFFVLDEA 372
            ..||..::.||.....:..:|||..||||..||||.:.       ||.|        ::.|:|||
  Fly   102 MGVRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLADH-------LTGCDTFSFDNLKYLVVDEA 159

  Fly   373 DALLKQGYTELIDRLHKQIPKITSDGRRLQMVVCSATLHAFEVKKMAERLMHFPTWVDL-----K 432
            |.:|...:.|.:..:.:.:||..      |.:..|||:..| :|:.:    .||...|.     .
  Fly   160 DRMLNGDFDESLSIIERCLPKTR------QNLFFSATMKDF-IKESS----IFPIASDCFEWSQD 213

  Fly   433 GEDAVPETV--HHVVCLVDPQMDTTWQSLRQPIGTDGVHDRDNVHPGNHSKETLSQAVKLLKGEY 495
            .:.|..||:  .:::|                    ..:|||.|         |.:|::..:   
  Fly   214 SDVATVETLDQRYLLC--------------------ADYDRDMV---------LIEALRKYR--- 246

  Fly   496 CVHAIDKHNMDRAIIFCRTKQDCDNLERFLRQRGGKHYSCVCLHGDRKPQERKENLEMFKRQQVK 560
                 :::.....:||..||:.|..|...|:   ......|||||..:.:||...|..||..|::
  Fly   247 -----EENENANVMIFTNTKKYCQLLSMTLK---NMEIDNVCLHGFMRQKERVAALSRFKSNQIR 303

  Fly   561 FLICTDVAARGLDITGLPFMINVTLPDDKTNYVHRIGRVGRAERMGLAIS---------LVATVP 616
            .||.||||||||||..:..::|..||.....|:||:||..||.|.|::||         |:|.:.
  Fly   304 TLIATDVAARGLDIPSVELVMNHMLPRTPKEYIHRVGRTARAGRKGMSISIFRFPRDLELLAAIE 368

  Fly   617 EKVWYHGEWCKSRGRSCNNTNLTEVRGCCIWYNEP---NLLAEVEDHLNITIQQVDKTMDVPVND 678
            |::               ||.|||         .|   .::..:...:|:|.::.:..:|  .||
  Fly   369 EEI---------------NTKLTE---------HPIDQRMVERIFMQVNVTRRESEMQLD--NND 407

  Fly   679 FD 680
            ||
  Fly   408 FD 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ddx1NP_524212.2 DEAD-like_helicase_N 4..>73 CDD:475120
SPRY_DDX1 91..242 CDD:293933
SrmB 283..613 CDD:440279 99/353 (28%)
Dbp45ANP_476927.1 SrmB 9..381 CDD:440279 115/425 (27%)
Blue background indicates that the domain is not in the aligned region.

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