DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddx1 and CG32344

DIOPT Version :9

Sequence 1:NP_524212.2 Gene:Ddx1 / 40457 FlyBaseID:FBgn0015075 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster


Alignment Length:452 Identity:116/452 - (25%)
Similarity:186/452 - (41%) Gaps:97/452 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 DDYGEAFGKADVIGCLLDLKNQEVSFTKNG-QNLGVAFRLPDNLAKETF-YPAVVLKN------- 234
            :|.|.:...||:      ||::.......| |::|:.|.|...:.|..: .|..:.:.       
  Fly    17 NDAGTSDRGADI------LKSKSKKNKSGGFQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILE 75

  Fly   235 -----AEMQFNFGKTDFKYAPGNGFVGACQAGPEHSKANPITGPAAGAPSAKPAPNAPQAIIMEP 294
                 |..:...|||            ||...|...|... ..|..||          :|:|:.|
  Fly    76 GRDVVAMAKTGSGKT------------ACFLIPLFEKLQR-REPTKGA----------RALILSP 117

  Fly   295 SRELAEQTYNQIEKFKYHLSNPEVRSLLLIGGVRLEEQKAQLMQGTHIVVGTPGRLEEMINSGLV 359
            :||||.|||..|::....:   |::|:|::||..::.|.:.:.....::|.||||...:.....:
  Fly   118 TRELAVQTYKFIKELGRFM---ELKSILVLGGDSMDSQFSAIHTCPDVIVATPGRFLHLCVEMDL 179

  Fly   360 LLTHCRFFVLDEADALLKQGYTELIDRLHKQIPKITSDGRRLQMVVCSATLHAFEVKKMAERLMH 424
            .|....:.|.||||.|.:.|:.|.::....::|.      ..|.|:.||||....| :.|...::
  Fly   180 KLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPS------SRQTVMFSATLPKLLV-EFARAGLN 237

  Fly   425 FPTWVDLKGEDAVPE--TVHHVVCLVDPQMDTTWQSLRQPIGTDGVHDRDNVHPGNHSKETLSQA 487
            .|..:.|..|..:|:  .:..:.|..|                    ||            .:..
  Fly   238 DPVLIRLDVESKLPDALALKFLYCRPD--------------------DR------------YTAL 270

  Fly   488 VKLLKGEYCVHAIDKHNMDRAIIFCRTKQDCDNLERFLRQRGGKHYSCVCLHGDRKPQERKENLE 552
            |.|||  |.:..     ..:.::|..|:...:.:...|.:.|   .|...::....|..||.|..
  Fly   271 VVLLK--YVIPV-----QSQTVVFAGTQHHVELISYILTEAG---ISNASVYSSLDPAARKINTA 325

  Fly   553 MFKRQQVKFLICTDVAARGLDITGLPFMINVTLPDDKTNYVHRIGRVGRAERMGLAISLVAT 614
            .|..::|..||.|||||||:||..|.|::|:..|.....:|||:||..||.|.|.|.|:|:|
  Fly   326 KFVNKKVSVLIVTDVAARGIDIPSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVST 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ddx1NP_524212.2 P-loop_NTPase 4..>62 CDD:304359
SPRY_DDX1 91..242 CDD:293933 14/76 (18%)
SrmB 279..>612 CDD:223587 90/334 (27%)
P-loop_NTPase <280..426 CDD:304359 40/145 (28%)
Helicase_C 492..602 CDD:278689 33/109 (30%)
CG32344NP_612028.4 DEADc 41..243 CDD:238167 58/234 (25%)
DEXDc 54..243 CDD:214692 54/221 (24%)
HELICc 263..384 CDD:238034 44/162 (27%)
DBP10CT 666..721 CDD:285373
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451645
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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