DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ddx1 and CG14443

DIOPT Version :10

Sequence 1:NP_524212.2 Gene:Ddx1 / 40457 FlyBaseID:FBgn0015075 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_572330.2 Gene:CG14443 / 31595 FlyBaseID:FBgn0029880 Length:736 Species:Drosophila melanogaster


Alignment Length:503 Identity:112/503 - (22%)
Similarity:190/503 - (37%) Gaps:150/503 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 DLKNQEVSFTKNGQNLGVAFRLPDN-------LAKETFYPAVVLKNAEM--QFNFGKTDFKYAPG 251
            :|....:||.::|.|..:..:|.|.       :..:|:..|...||..|  ....|||.....||
  Fly   324 NLPEPVLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTLGYLLPG 388

  Fly   252 -----NGFVGACQAGPEHSKANPITGPAAGAPSAKPAPNAPQAIIMEPSRELAEQTYNQIEKFKY 311
                 |      |.|....|..||                  .:|:...||.|.....::    .
  Fly   389 IMKMHN------QRGLMQHKKGPI------------------VLILVDCREAAVMVQREV----L 425

  Fly   312 HLSNP-EVRSLLLIGGVRLEEQKAQLMQG---THIVVGTPGRLEEMINS--GLVLLTHCRFFVLD 370
            :.:|| |:|:..|:|..:        .||   ..::|.:.|||.:||::  .:|.|..|.:.|||
  Fly   426 YYTNPLELRTHCLLGNSQ--------WQGHAECDLLVASAGRLLQMIDNKKHVVELERCTYLVLD 482

  Fly   371 EADALLKQGYTELIDRL------HKQIPKITSDGRRLQMVVCSATLHAFEVKKMAERLMHFPTWV 429
            ..|.::..|....|.||      |.|:             :.|:|..:..:|:||.:.:...|.:
  Fly   483 NIDRMIDVGLEGNICRLLCRLRPHAQL-------------IVSSTSWSSNLKRMANKFLGQYTAI 534

  Fly   430 DLKGEDAVPETVHHVVCLVDPQMDTTWQSLRQPIGTDGVHDRDNVHPGNHSKETLSQAVKLLKGE 494
            .: ||      ::::        ....|::||         |..|..|      ||:..:|:|..
  Fly   535 RV-GE------INNI--------GVRLQNIRQ---------RVEVVNG------LSKVERLMKEL 569

  Fly   495 YCVHAIDKHNM-DRAIIFCRTKQDCDNLERFLRQRGGKHYSCV-C--LHGDRKPQERKENLEMFK 555
            ..::  |..:: .:.:|:.:.::..:.|...:|       :|| |  :||.|..||.:..:..|.
  Fly   570 TAIY--DTSDIPGKVVIYVKRQKVVEELVDLIR-------NCVPCEGIHGGRTAQENQGIIHDFG 625

  Fly   556 RQQVKFLICTDVAARGLDITGLPFMINVTLPDDKTNYVHRIGRVGRAERMGLAISLVATVPEKVW 620
            ......::.|.:.:..||:.|:.::||...||:...||.|:.|.|                    
  Fly   626 TGAYNIIVATQMTSNCLDVPGIRYVINYDFPDNIDKYVQRMSRTG-------------------- 670

  Fly   621 YHGEWCKSRGRSCNNTNLTEVRGCCIWYNEPNLLAEVEDHLNITIQQV 668
                 |.|..|:|      ||.......|. .|:.||.|.|.|..|::
  Fly   671 -----CLSYNRNC------EVISFFTMANY-KLVTEVVDFLKICKQEI 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ddx1NP_524212.2 DEAD-like_helicase_N 4..>73 CDD:475120
SPRY_DDX1 91..242 CDD:293933 12/54 (22%)
SrmB 283..613 CDD:440279 75/345 (22%)
CG14443NP_572330.2 DEAD-like_helicase_N <310..720 CDD:475120 112/503 (22%)
Blue background indicates that the domain is not in the aligned region.

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