DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ddx1 and tofu-2

DIOPT Version :10

Sequence 1:NP_524212.2 Gene:Ddx1 / 40457 FlyBaseID:FBgn0015075 Length:727 Species:Drosophila melanogaster
Sequence 2:NP_504786.2 Gene:tofu-2 / 179089 WormBaseID:WBGene00017620 Length:433 Species:Caenorhabditis elegans


Alignment Length:315 Identity:92/315 - (29%)
Similarity:139/315 - (44%) Gaps:74/315 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DRGNALAVTPDGLRCQSREFKEWHGCRATTGVRGKGKFYFEATVTDEGLCRVGWSTQQANLDLGT 159
            |:...|.:...||.|:|...|.|.|.|.|.|:.|.||:|:|.|:|.:|||||||:|...:|::|.
 Worm    15 DQDLHLEIDETGLACKSEVKKRWLGARGTAGLYGNGKYYYEVTITSKGLCRVGWATLGGSLNIGK 79

  Fly   160 CRMGFGFGGTGKKSNNRQFDDYGEAFGKADVIGCLLDLKNQEVSFTKNGQNLGVAFRLPDNLAKE 224
            ....||:||||.||.:::|||||..|...|||||.|||.::.:.::|||:....||.: |...|.
 Worm    80 GLDSFGYGGTGMKSTHKKFDDYGLPFTLNDVIGCYLDLDSRTIWWSKNGEQFPAAFSI-DVKYKN 143

  Fly   225 T---FYPAVVLKNAEMQFNFGKTDFKYAPGNGFVGACQAGPEHSKANPITGPAAGAPSAKPAPNA 286
            :   .:|||:.:|:.:..|||...||:.|||.|.....|                          
 Worm   144 SNTCLFPAVLCQNSSLSVNFGSQP
FKFPPGNQFTAVSDA-------------------------- 182

  Fly   287 PQAIIMEPSRELAEQTYNQIEKFKYHLSNPEVRSLLLIGGVRLEEQKAQLMQGTHIVVGTPGRLE 351
                   |:..:...:|.:...|:                              |:||..|..:|
 Worm   183 -------PNENVNWWSYEEQNSFE------------------------------HVVVKLPFAVE 210

  Fly   352 EMINSGLVLLTHCRFFVLDEADALLKQGYTELIDRLHKQIPK-----ITSDGRRL 401
            |.:::...:  |.:..:.:......||.....|.|..:.|.|     :.:||.||
 Worm   211 EDVHNEFRM--HTKLMLTELKRTQCKQDKDGSIRRTLQPISKTICAFLNTDGGRL 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ddx1NP_524212.2 DEAD-like_helicase_N 4..>73 CDD:475120
SPRY_DDX1 91..242 CDD:293933 63/149 (42%)
SrmB 283..613 CDD:440279 20/124 (16%)
tofu-2NP_504786.2 SPRY_DDX1 11..167 CDD:293933 65/152 (43%)
COG2865 227..>321 CDD:442112 10/37 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.