Sequence 1: | NP_001262205.1 | Gene: | Rich / 40456 | FlyBaseID: | FBgn0028500 | Length: | 1429 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_568507.3 | Gene: | AT5G28350 / 832920 | AraportID: | AT5G28350 | Length: | 1127 | Species: | Arabidopsis thaliana |
Alignment Length: | 1367 | Identity: | 322/1367 - (23%) |
---|---|---|---|
Similarity: | 524/1367 - (38%) | Gaps: | 376/1367 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MYYPVGWPKRVGLALPGESASIRHICCDAVKI---LVAAVGDDFLGIW-YANPLIPIAYFRRTED 61
Fly 62 SLRQYGANQLIVWKPDSRQLALLTASGSLLLYQLDFEANGMGILQQIDPPAASLKRDSAELFIKE 126
Fly 127 NIPRLSLRELCSVTLGSVITTVC-----CISLSE-------LLLATQSCELLRLQWT-ELEHA-- 176
Fly 177 -------ENDLEL---------------PALSS-IKLRDIPFYVQQQPQQSARNVPPLNRD---- 214
Fly 215 ---------SYVASLEYSPFIGG---CAAVFSDRRAAFLIANHLRFETDHMHGFWVPDVEDASVC 267
Fly 268 SVNHKFRLLAYGQESSAVKVYAIDDATGGLEFSHRLILTENI-------LPDSLGSVNELKWSPD 325
Fly 326 GCVLAVSWTNGGLSLWSTFGALLMSTLSWDFGL--------NVDLVCQ-NPLK--IRRLEWSTEG 379
Fly 380 YQLFMLKLHPEKDKSNVLQLQFVKSALSMNPCMTTSPHILLQGDDCLYLNQGNNLELTYAGSHGT 444
Fly 445 FPSSGLGSDEDISGDGDCLELKQSPHTGSILTESKYWTVLQLPLNYAATNWPIRYAAIDPDGLHL 509
Fly 510 AVAGRTGLAHYSLVTRRWKLFGNESQEKDFVVSGGLLWWHGFVVMGCYSLLDRTDELRCYPADCK 574
Fly 575 LDNQ--YGHKLQVRAPVISLNSFRHQLIVLTADGIVSLFN------MSKNSAYALDIECAYELDV 631
Fly 632 KSICIHPACIVSLTVTNLKNELKPQGQLGGDQ----------AETIIVNVCGRILMIQRDAGEQV 686
Fly 687 PNTLLATCLASCVEVFWLS--HSLERC-AMRDCLWLYSGAHGMRVWLPILPPGRERREGEQGGAQ 748
Fly 749 RLHSFMSKRIMLSFPLKLYPLVVLFDNVIVLGVENESTLYANEQVSHFSLPFAVME--RKSQIYL 811
Fly 812 HKVLRQLIKRNLGYSAWEMAQSCCSLPYFPHALELLLHEVLEEEATSKQPIPD------------ 864
Fly 865 -AQLPSILDFIREFPVYLETIVQCARKTEIALWPYLFSMAGKPKDLFQMCLQSEQLDTAASYLII 928
Fly 929 LQNLEPSVVSKQYATMLLDIALQQRKWELAKDLIRFLKAIDPNEIDSPRSSMVVNVKIAPPPQVN 993
Fly 994 TQQQVNQNADAFNMVLGPIARERSFSTTVTSNLPKDKQAS---GTPGVAPVTESSSAGAPSVVRR 1055
Fly 1056 RSTKQRETFCIDLILQRHARQLLQNHKLMDLGYMCAYLDFHLVSWLSQESERAAKLDDFAGALQA 1120
Fly 1121 LHEELDLPIPFPTAAKDDFAQIRGSLRQTGGGGSSQTSESGYFSLATPNGAATQSPQLQPSIREE 1185
Fly 1186 EEELQQPSSLPILKT-RSGSQLSFDNFRYR----RLYSLPTSEDDLA-------VDILPQKLSIK 1238
Fly 1239 LR 1240 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rich | NP_001262205.1 | WD40 repeat | 265..312 | CDD:293791 | 8/53 (15%) |
RIC1 | 713..974 | CDD:284476 | 86/275 (31%) | ||
AT5G28350 | NP_568507.3 | WD40 | 33..493 | CDD:225201 | 130/575 (23%) |
WD40 repeat | 71..130 | CDD:293791 | 18/82 (22%) | ||
WD40 repeat | 135..170 | CDD:293791 | 7/34 (21%) | ||
WD40 repeat | 192..249 | CDD:293791 | 12/56 (21%) | ||
WD40 repeat | 310..348 | CDD:293791 | 16/38 (42%) | ||
RIC1 | 677..932 | CDD:284476 | 86/273 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 158 | 1.000 | Domainoid score | I1295 |
eggNOG | 1 | 0.900 | - | - | E1_KOG2006 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H13806 | |
Inparanoid | 1 | 1.050 | 264 | 1.000 | Inparanoid score | I953 |
OMA | 1 | 1.010 | - | - | QHG55710 | |
OrthoDB | 1 | 1.010 | - | - | D261419at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003567 | |
OrthoInspector | 1 | 1.000 | - | - | otm2734 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103873 | |
Panther | 1 | 1.100 | - | - | O | PTHR22746 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X3432 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.880 |