| Sequence 1: | NP_001262205.1 | Gene: | Rich / 40456 | FlyBaseID: | FBgn0028500 | Length: | 1429 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006231317.1 | Gene: | Ric1 / 309306 | RGDID: | 1310016 | Length: | 1427 | Species: | Rattus norvegicus |
| Alignment Length: | 1534 | Identity: | 515/1534 - (33%) |
|---|---|---|---|
| Similarity: | 790/1534 - (51%) | Gaps: | 249/1534 - (16%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MYYPVGWPKRVGLALPGESASIRHICCDAVKILVAAVGDDFLGIWYANPLIPIAYFRRTEDSLRQ 65
Fly 66 YGANQLIVWKPDSRQLALLTASGSLLLYQLDFEANGMGILQQIDPPAASLKRDSAELFIKEN-IP 129
Fly 130 RLSLRELCSVTLGSVITTVCCISLSELLLATQSCELLRLQWTELEHAENDLELPALSSIKLRDIP 194
Fly 195 FYVQQQPQQSARNVPPLN-RDSYVASLEYSPFIGGCAAVFSDRRAAFLIANHLRFETDHMHGFWV 258
Fly 259 PDVEDASVCSVNHKFRLLAYGQESSAVKVYAIDDATGGLEFSHRLILTENILPD---SLGSVNEL 320
Fly 321 KWSPDGCVLAVSWTNGGLSLWSTFGALLMSTLSWDFGLNVDLVCQNPLKIRRLEWSTEGYQLFML 385
Fly 386 ----KLHPEKD--------KSNVLQLQFVKSALSMNPCMTTSPHILLQGDDCLYLN-----QGNN 433
Fly 434 LELTYAGSH-------GTFPSSGLGSDEDISGDGDCLELKQSPHTGSILTESKYWTVLQLPLNYA 491
Fly 492 ATNWPIRYAAIDPDGLHLAVAGRTGLAHYSLVTRRWKLFGNESQEKDFVVSGGLLWWHGFVVMGC 556
Fly 557 YSLLDRTDELRCYPADCKLDNQYGHKLQVRAPVISLNSFRHQLIVLTADGIVSLFNM---SKNSA 618
Fly 619 YALDIECAYELDVKSICIHPACIVSLTVTNLKNE----LKPQGQLGGDQAETIIVNVCGRILMIQ 679
Fly 680 RD-AGEQV------------PNTLLATC----LASCVEVFWLS--------HSLERCAMRDCLWL 719
Fly 720 YSGAHGMRVWLPILPPGRERREGEQGGAQRLHSFMSKRIMLSFPLKLYPLVVLFDNVIVLGVENE 784
Fly 785 STLY--------ANEQVSHFSLPFAVMERKSQIYLHKVLRQLIKRNLGYSAWEMAQSCCSLPYFP 841
Fly 842 HALELLLHEVLEEEATSKQPIPDAQLPSILDFIREFPVYLETIVQCARKTEIALWPYLFSMAGKP 906
Fly 907 KDLFQMCLQSEQLDTAASYLIILQNLEPSVVSKQYATMLLDIALQQRKWELAKDLIRFLKAIDPN 971
Fly 972 EIDSPRSSMVVNVKIAPPPQVNTQQQVNQNADAFNMVLGPIARERSFSTTVTS-NLPKDKQASGT 1035
Fly 1036 PGVAPVTES-SSAGAPSVVR-RRSTKQRETFCIDLILQRHARQLLQNHKLMDLGYMCAYLDFHLV 1098
Fly 1099 SWLSQESERAAKLDDFAGALQALHEELDLPIPFPTAAKDDFAQIRGSLRQTG------------- 1150
Fly 1151 ------GGGSSQTSESGYFSLATPNG----AATQSPQLQP------SIREEEEELQQPSSLPILK 1199
Fly 1200 TRSGSQLSFD------NFRYRRLYSLPTSE-DDLAVDIL---PQKLSIKLRYLLQLFIEANCTDY 1254
Fly 1255 ALVLSILLQDAASISRIVNGIIRSESV--HTCRRTESALKQLSQ-STFEHSGSLYRGFVLTLQPH 1316
Fly 1317 VYLLEQYIQSLGDAPCSQLQDAGPGTEQGVDVSTGLQGLQNEVGEFVPNSQQANGNQWTVADLNP 1381
Fly 1382 NHQRLTRHASLESNGNAVVASGSSAHSTPTQRQLSRQNS 1420 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rich | NP_001262205.1 | WD40 repeat | 265..312 | CDD:293791 | 20/46 (43%) |
| RIC1 | 713..974 | CDD:284476 | 147/268 (55%) | ||
| Ric1 | XP_006231317.1 | WD40 repeat | 254..304 | CDD:293791 | 22/49 (45%) |
| WD40 repeat | 310..350 | CDD:293791 | 21/39 (54%) | ||
| RIC1 | 736..993 | CDD:284476 | 148/273 (54%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166342049 | |
| Domainoid | 1 | 1.000 | 388 | 1.000 | Domainoid score | I763 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG2006 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H13806 | |
| Inparanoid | 1 | 1.050 | 750 | 1.000 | Inparanoid score | I550 |
| OMA | 1 | 1.010 | - | - | QHG55710 | |
| OrthoDB | 1 | 1.010 | - | - | D261419at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0003567 | |
| OrthoInspector | 1 | 1.000 | - | - | oto96336 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_103873 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR22746 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X3432 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 16 | 15.770 | |||||