DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpLP0 and RPP0

DIOPT Version :10

Sequence 1:NP_524211.1 Gene:RpLP0 / 40451 FlyBaseID:FBgn0000100 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_013444.1 Gene:RPP0 / 851052 SGDID:S000004332 Length:312 Species:Saccharomyces cerevisiae


Alignment Length:316 Identity:162/316 - (51%)
Similarity:224/316 - (70%) Gaps:7/316 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAIR 66
            :||.    ||:||.|:.|..:|:...|:||.|||.|:||..:|..|||.||||||||||:|:|||
Yeast     4 IREK----KAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIR 64

  Fly    67 GHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLG 131
            |.|.:.|..|||||.:|||||||||...|.|:::.::.::|.||||.||:||..:.:.|.|||:.
Yeast    65 GFLSDLPDFEKLLPFVKGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWVRAVNTGME 129

  Fly   132 PEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDSG 196
            |.||||||||.:||||::|||||::||.::..|:|||.|||:|||:||||||::||.|.||||:|
Yeast   130 PGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTFGLTVVQVYDNG 194

  Fly   197 SIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFKE 261
            .:|...||||..|:|.:.|...|:.:|::.|::||||:.|..|::.|.:|:|||:|......:.|
Yeast   195 QVFPSSILDITDEELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNYKDLLAVAIAASYHYPE 259

  Fly   262 ATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317
            ...:.:.|::|.|:||||.|:.:.|:|.|...:|.|.:   |.||.||||||||||
Yeast   260 IEDLVDRIENPEKYAAAAPAATSAASGDAAPAEEAAAE---EEEESDDDMGFGLFD 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpLP0NP_524211.1 PTZ00135 1..275 CDD:240285 138/272 (51%)
RPP0NP_013444.1 Ribosomal_L10_P0 5..312 CDD:469747 160/313 (51%)

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