DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpLP0 and AT3G11250

DIOPT Version :9

Sequence 1:NP_001262202.1 Gene:RpLP0 / 40451 FlyBaseID:FBgn0000100 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_187734.1 Gene:AT3G11250 / 820296 AraportID:AT3G11250 Length:323 Species:Arabidopsis thaliana


Alignment Length:321 Identity:171/321 - (53%)
Similarity:228/321 - (71%) Gaps:4/321 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAI 65
            ||:..||..|..|..|:.:|.||:.:..:|.||||||.|:||||..|||.:||||||||||::::
plant     1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 65

  Fly    66 RGHLEN--NPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNT 128
            |.|.||  |..:..|||.::||||.:||||||.||.:::.:.||.||||.|.:||:.|::...||
plant    66 RIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNT 130

  Fly   129 GLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVY 193
            ||.|.:|||||.|:|||||:|||:|||..|.::|.|||||:|||.||..|.|.||||||:|..||
plant   131 GLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVY 195

  Fly   194 DSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVE 258
            |:||:||||:||:..:.|..||..|::.:.::.|:|.|||:|:|||...|.:||.||||..|:..
plant   196 DNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATDYT 260

  Fly   259 FKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPE--SESEEEDDDMGFGLFD 317
            |.:|..:||::||||||..||:|.:|.|.||:.:....||..|  .||:|||.:.||||||
plant   261 FPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAKVEEKKEESDEEDYEGGFGLFD 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpLP0NP_001262202.1 PTZ00135 1..275 CDD:240285 148/275 (54%)
Ribosomal_P0_L10e 8..182 CDD:240221 97/175 (55%)
Ribosomal_60s 232..>285 CDD:278836 27/52 (52%)
AT3G11250NP_187734.1 PTZ00135 1..277 CDD:240285 148/275 (54%)
Ribosomal_P0_L10e 8..184 CDD:240221 97/175 (55%)
Ribosomal_60s 234..320 CDD:278836 42/85 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 102 1.000 Domainoid score I2294
eggNOG 1 0.900 - - E1_COG0244
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6517
Inparanoid 1 1.050 337 1.000 Inparanoid score I656
OMA 1 1.010 - - QHG62173
OrthoDB 1 1.010 - - D1102823at2759
OrthoFinder 1 1.000 - - FOG0003199
OrthoInspector 1 1.000 - - otm3207
orthoMCL 1 0.900 - - OOG6_100781
Panther 1 1.100 - - O PTHR45699
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1858
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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