DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment RpLP0 and Rplp0

DIOPT Version :9

Sequence 1:	NP_001262202.1	Gene:	RpLP0 / 40451	FlyBaseID:	FBgn0000100	Length:	317	Species:	Drosophila melanogaster
Sequence 2:	NP_071797.1	Gene:	Rplp0 / 64205	RGDID:	621247	Length:	317	Species:	Rattus norvegicus

Alignment Length:	321	Identity:	218/321 - (67%)
Similarity:	261/321 - (81%)	Gaps:	8/321 - (2%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAI 65
            |.||::|.||:.||:|:::|.|::|||||||||||||||||.||.||||.|||||||||||||||
  Rat     1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65

  Fly    66 RGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGL 130
            ||||||||.||||||||:|||||||||.||.|:||.||.:||.|.||.|||||..|.:|||||||
  Rat    66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGL 130

  Fly   131 GPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDS 195
            |||||||||||.|.||||:|||||::||.::|.|||||||||||||||||||||:|||:.||:|:
  Rat   131 GPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDN 195

  Fly   196 GSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFK 260
            |||:|||:|||..:.|..:|.:||.|:|:|||.:||||:||.||||.||:|.:||::..|:..|.
  Rat   196 GSIYSPEVLDITEQALHTRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFP 260

  Fly   261 EATTIKEYIKDPSKFAA----AASASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317
            .|..:|.::.|||.|||    ||:.:||||| .|...|.|||:   ||||.|:||||||||
  Rat   261 LAEKVKAFLADPSAFAAAAPVAAATTAAPAA-AAAPAKVEAKE---ESEESDEDMGFGLFD 317

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RpLP0	NP_001262202.1	PTZ00135	1..275	CDD:240285	190/273 (70%)
		Ribosomal_P0_L10e	8..182	CDD:240221	136/173 (79%)
		Ribosomal_60s	232..>285	CDD:278836	26/56 (46%)
Rplp0	NP_071797.1	PTZ00135	1..317	CDD:240285	216/319 (68%)
		Ribosomal_P0_L10e	9..182	CDD:240221	136/172 (79%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	294..317		15/25 (60%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166340517
Domainoid	1	1.000	164	1.000	Domainoid score	I3857
eggNOG	1	0.900	-	-		E1_COG0244
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H6517
Inparanoid	1	1.050	434	1.000	Inparanoid score	I1646
OMA	1	1.010	-	-		QHG62173
OrthoDB	1	1.010	-	-		D1102823at2759
OrthoFinder	1	1.000	-	-		FOG0003199
OrthoInspector	1	1.000	-	-		oto96816
orthoMCL	1	0.900	-	-		OOG6_100781
Panther	1	1.100	-	-	LDO	PTHR45699
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1858
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	15	14.770