DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpLP0 and rplp0

DIOPT Version :9

Sequence 1:NP_001262202.1 Gene:RpLP0 / 40451 FlyBaseID:FBgn0000100 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_571655.2 Gene:rplp0 / 58101 ZFINID:ZDB-GENE-000629-1 Length:316 Species:Danio rerio


Alignment Length:324 Identity:219/324 - (67%)
Similarity:259/324 - (79%) Gaps:15/324 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAI 65
            |.||::|.||:.||:|:::|.|::|||||||||||||||||.||.||||.|||||||||||||||
Zfish     1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMRKAI 65

  Fly    66 RGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGL 130
            ||||||||.||:|||||:|||||||||.||.||||.||.:||.|.||.|||||..|.:|||||||
Zfish    66 RGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCEVTVPAQNTGL 130

  Fly   131 GPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDS 195
            |||||||||||.|.||||:|||||::||.::|||||||||||||||||||||||||||:.||||:
Zfish   131 GPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNISPFSYGLIIQQVYDN 195

  Fly   196 GSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFK 260
            ||::|||:|||..:.|..:|.:||.|:|:|||.:||||:||.||:|.||:|.:||:...|:..|.
Zfish   196 GSVYSPEVLDITEDALHKRFLEGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVETDYTFP 260

  Fly   261 EATTIKEYIKDPSKFAAAA-------SASAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317
            .|..:|.|:.||:.||.||       ..||||||      ||||  |:.||||.|:||||||||
Zfish   261 LAEKVKAYLADPTAFAVAAPVAAATEQKSAAPAA------KEEA--PKEESEESDEDMGFGLFD 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpLP0NP_001262202.1 PTZ00135 1..275 CDD:240285 191/273 (70%)
Ribosomal_P0_L10e 8..182 CDD:240221 137/173 (79%)
Ribosomal_60s 232..>285 CDD:278836 25/59 (42%)
rplp0NP_571655.2 PTZ00135 1..272 CDD:240285 189/270 (70%)
Ribosomal protein L10 5..107 78/101 (77%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..316 22/37 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580315
Domainoid 1 1.000 164 1.000 Domainoid score I3909
eggNOG 1 0.900 - - E1_COG0244
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6517
Inparanoid 1 1.050 430 1.000 Inparanoid score I1697
OMA 1 1.010 - - QHG62173
OrthoDB 1 1.010 - - D1102823at2759
OrthoFinder 1 1.000 - - FOG0003199
OrthoInspector 1 1.000 - - oto38854
orthoMCL 1 0.900 - - OOG6_100781
Panther 1 1.100 - - LDO PTHR45699
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2259
SonicParanoid 1 1.000 - - X1858
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.