DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpLP0 and F10E7.5

DIOPT Version :10

Sequence 1:NP_524211.1 Gene:RpLP0 / 40451 FlyBaseID:FBgn0000100 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_495470.1 Gene:F10E7.5 / 174168 WormBaseID:WBGene00017347 Length:220 Species:Caenorhabditis elegans


Alignment Length:176 Identity:45/176 - (25%)
Similarity:75/176 - (42%) Gaps:15/176 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAIRGHLENNP---QLEKLLPHIK 83
            |::...||....|:.|.:...||...:..:....|||.::..|: |..:::.   ||.|....:|
 Worm    35 DQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIAL-GKQKSDEYANQLHKASAILK 98

  Fly    84 GNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFF------QALS 142
            |..|.:||.....||..:..|:.....||.|.:|...|::|.     ||.....|      :.|.
 Worm    99 GQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPE-----GPISQFAFSMEPQLRKLG 158

  Fly   143 IPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLI 188
            :|||:.||.|.:.....:.|.|:.:...:|.:|....:....:.||
 Worm   159 LPTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEVKMSQFRLI 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpLP0NP_524211.1 PTZ00135 1..275 CDD:240285 45/176 (26%)
F10E7.5NP_495470.1 Ribosomal_P0_like 24..184 CDD:240222 41/154 (27%)

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