DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpLP0 and Rplp0

DIOPT Version :9

Sequence 1:NP_001262202.1 Gene:RpLP0 / 40451 FlyBaseID:FBgn0000100 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_031501.1 Gene:Rplp0 / 11837 MGIID:1927636 Length:317 Species:Mus musculus


Alignment Length:321 Identity:218/321 - (67%)
Similarity:261/321 - (81%) Gaps:8/321 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMRKAI 65
            |.||::|.||:.||:|:::|.|::|||||||||||||||||.||.||||.|||||||||||||||
Mouse     1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAI 65

  Fly    66 RGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGL 130
            ||||||||.||||||||:|||||||||.||.|:||.||.:||.|.||.|||||..|.:|||||||
Mouse    66 RGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGL 130

  Fly   131 GPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNISPFSYGLIVNQVYDS 195
            |||||||||||.|.||||:|||||::||.::|.|||||||||||||||||||||:|||:.||:|:
Mouse   131 GPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDN 195

  Fly   196 GSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHSIANGFKNLLAIAATTEVEFK 260
            |||::||:|||..:.|.::|.:||.|:|:|||.:||||:||.||||.||:|.:||::..||..|.
Mouse   196 GSIYNPEVLDITEQALHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETEYTFP 260

  Fly   261 EATTIKEYIKDPSKFAAAASA----SAAPAAGGATEKKEEAKKPESESEEEDDDMGFGLFD 317
            ....:|.::.|||.|||||.|    :||||| .|...|.|||:   ||||.|:||||||||
Mouse   261 LTEKVKAFLADPSAFAAAAPAAAATTAAPAA-AAAPAKAEAKE---ESEESDEDMGFGLFD 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpLP0NP_001262202.1 PTZ00135 1..275 CDD:240285 189/273 (69%)
Ribosomal_P0_L10e 8..182 CDD:240221 136/173 (79%)
Ribosomal_60s 232..>285 CDD:278836 27/56 (48%)
Rplp0NP_031501.1 PTZ00135 1..275 CDD:240285 189/273 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..317 16/26 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836811
Domainoid 1 1.000 164 1.000 Domainoid score I3936
eggNOG 1 0.900 - - E1_COG0244
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6517
Inparanoid 1 1.050 434 1.000 Inparanoid score I1686
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62173
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003199
OrthoInspector 1 1.000 - - oto93274
orthoMCL 1 0.900 - - OOG6_100781
Panther 1 1.100 - - LDO PTHR45699
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2259
SonicParanoid 1 1.000 - - X1858
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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