Sequence 1: | NP_001305844.1 | Gene: | LSAMP / 4045 | HGNCID: | 6705 | Length: | 361 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_731114.2 | Gene: | Ama / 40831 | FlyBaseID: | FBgn0000071 | Length: | 341 | Species: | Drosophila melanogaster |
Alignment Length: | 336 | Identity: | 99/336 - (29%) |
---|---|---|---|
Similarity: | 151/336 - (44%) | Gaps: | 35/336 - (10%) |
- Green bases have known domain annotations that are detailed below.
Human 6 QPDRKQLPLVLLRLLCLLPT-----GLPVRSVDFNRGTDNITVRQGDTAILRCVVEDKNS-KVAW 64
Human 65 LNR------SGIIFAGHDKWSL-DPR-----VELEKRHSLEYSLRIQKVDVYDEGSYTCSVQTQH 117
Human 118 EPK-TSQVYLIVQVPPKIS-NISSDVTVNEGSNVTLVCMANGRPEPVITWRH----LTPTGREFE 176
Human 177 GEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVTVNYPPTITESKSNEA-TTGRQASLKCE 240
Human 241 ASAVPAPDFEWYRDDTRINSANGLEIKSTEGQSSLT-----VTNVTEEHYGNYTCVAANKLGVTN 300
Human 301 ASLVLFKRVLP 311 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LSAMP | NP_001305844.1 | Ig | 38..128 | CDD:386229 | 28/103 (27%) |
Ig | 132..215 | CDD:386229 | 29/87 (33%) | ||
Ig_3 | 219..294 | CDD:372822 | 22/80 (28%) | ||
Ama | NP_731114.2 | I-set | 33..143 | CDD:254352 | 30/113 (27%) |
Ig | 37..127 | CDD:299845 | 24/89 (27%) | ||
IG_like | 154..234 | CDD:214653 | 26/80 (33%) | ||
IGc2 | 161..223 | CDD:197706 | 23/62 (37%) | ||
I-set | 254..330 | CDD:254352 | 25/75 (33%) | ||
IGc2 | 254..322 | CDD:197706 | 21/67 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165143406 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D265311at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000150 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR42757 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3058 |
SonicParanoid | 1 | 1.000 | - | - | X97 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.880 |