DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7139 and n4bp2l2

DIOPT Version :10

Sequence 1:NP_649378.1 Gene:CG7139 / 40448 FlyBaseID:FBgn0027532 Length:969 Species:Drosophila melanogaster
Sequence 2:XP_693749.2 Gene:n4bp2l2 / 565380 ZFINID:ZDB-GENE-131121-433 Length:450 Species:Danio rerio


Alignment Length:142 Identity:63/142 - (44%)
Similarity:88/142 - (61%) Gaps:7/142 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 LMIIMRGPSGSGKSTLAESLLRQAHLLDRHQVRDFVLSSDDYFKTRRGYVFNPTLLPAAHEWNQQ 168
            :::::||..||||||||..||...       ....|||:||||.....|.|:..||..||:|||:
Zfish   296 VLVLLRGVPGSGKSTLARELLSTG-------PNGVVLSTDDYFFQDNRYAFDSALLGDAHDWNQK 353

  Fly   169 RVRDKAASGWSPIIVDNTNTMVWEMQPYVQFAVRHGYVIELLEPNTSWCKSASKLAQKNVHNVPR 233
            |.......|.||:|:||||...|||:|||:.|:.:||.::.|||:|.|....::|.::|.|.|||
Zfish   354 RAEQAMLDGCSPVIIDNTNVKAWEMKPYVELALENGYRVDFLEPDTPWKCDPAQLEKRNKHGVPR 418

  Fly   234 ENIQRMLERFER 245
            :.|.:||:.|||
Zfish   419 DTIAKMLDGFER 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7139NP_649378.1 AAA_33 105..245 CDD:463952 61/139 (44%)
DUF1771 812..870 CDD:462528
SMR 877..960 CDD:214676
n4bp2l2XP_693749.2 AAA_33 297..431 CDD:463952 63/141 (45%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.