DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act79B and ARP8

DIOPT Version :9

Sequence 1:NP_001262200.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_014784.1 Gene:ARP8 / 854309 SGDID:S000005667 Length:881 Species:Saccharomyces cerevisiae


Alignment Length:620 Identity:108/620 - (17%)
Similarity:202/620 - (32%) Gaps:252/620 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DEEASALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR--------------------------- 40
            ::..:.:|:..||...|.||..||.| .|.|:.|..|:                           
Yeast   263 NDPTATIVIHPGSNSIKIGFPKDDHP-VVVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNI 326

  Fly    41 -----------------------HQGVMVG--------MGQKD-------------CYVGDEA-- 59
                                   |:.|:..        :.:|:             .|.|.:|  
Yeast   327 KSEMEKNFRERMRYYKRKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALR 391

  Fly    60 ----------QSKRGILSLKYPIEHGIITNWDDMEKVWHHTFYNE-LRVAP---EEHPVLLTEAP 110
                      ..:.|..::|.|....:.....|:.|:..|...:| |.|.|   .::.|:|....
Yeast   392 CVDEKFVIRKPFRGGSFNVKSPYYKSLAELISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPD 456

  Fly   111 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASG-RTTGIVLDSGDGVSHTVPIYEGYALPH 174
            :..|::.|...:::.......|:.:..:::.:.|.:| .|:..|::.|...:....:.||..|.|
Yeast   457 IFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVNIGAAETRIACVDEGTVLEH 521

  Fly   175 AILRLDLAGRDLT----------DYLM---KILTERGY--------SFTTTAEREIVRDI----- 213
            :.:.||..|.|:|          |:.:   ||.::.|:        :|||..:.::...:     
Yeast   522 SAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVAVQLYNFMN 586

  Fly   214 ------KEK----------LCYVALDFEQEM----ATAAASTSLEKSYELPDGQVITIGNE---- 254
                  .||          |..:||.|.|..    .::..::|||  ::||:.:.: ..||    
Yeast   587 RSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLE--FQLPESRDL-FTNELNDW 648

  Fly   255 ----RFRTPEA-----------------------------------LFQPSFLGMESCGIHETVY 280
                :|.:.|.                                   ..:.:|..:|. .|.:::.
Yeast   649 NSLSQFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEK-AIVQSIA 712

  Fly   281 QSIMKCDVDIRKDLYANNVLSGGTTMYPG----IADR--------------------MQKEITAL 321
            .:.:..||......|:|.::.||::..|.    :.||                    :.|||..|
Yeast   713 NASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDL 777

  Fly   322 ------AP------------STIKIKI------------------------IAPPERKYS----V 340
                  ||            :.||.||                        |.||.|..:    :
Yeast   778 EGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQHQNIEHQNGNEHIFPVSIIPPPRDMNPALII 842

  Fly   341 WIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 375
            |.|.|:||.:...::::|:..::|..|..|:..||
Yeast   843 WKGASVLAQIKLVEELFITNSDWDVHGSRILQYKC 877

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_001262200.1 PTZ00281 1..376 CDD:173506 108/620 (17%)
ARP8NP_014784.1 NBD_sugar-kinase_HSP70_actin 42..>447 CDD:418402 29/184 (16%)
ACTIN 266..878 CDD:214592 108/617 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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