DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act79B and ARP6

DIOPT Version :9

Sequence 1:NP_001262200.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_013186.1 Gene:ARP6 / 850774 SGDID:S000004075 Length:438 Species:Saccharomyces cerevisiae


Alignment Length:448 Identity:98/448 - (21%)
Similarity:173/448 - (38%) Gaps:109/448 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EASALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD----CYVGDEAQSKRGI 65
            |...:|:||||...|.|.:.:..|.....::.              ||    .|:.:..::.:.|
Yeast     2 ETPPIVIDNGSYEIKFGPSTNKKPFRALNALA--------------KDKFGTSYLSNHIKNIKDI 52

  Fly    66 LSLKY--PIEHGIITNWDDMEKVWHHTFYNELRVAPEE-----------HPVLLTEAPLNPKANR 117
            .|:.:  |.|.|.:|.|:....:|.:..:|     |.|           |.::.:|:.:......
Yeast    53 SSITFRRPHELGQLTLWELESCIWDYCLFN-----PSEFDGFDLKEGKGHHLVASESCMTLPELS 112

  Fly   118 EKMTQIMFETFNSPAMYVAIQAVLSLYA----------SGRTTGI-------------------- 152
            :...|::||.:...:::.:..||...:.          ||:...|                    
Yeast   113 KHADQVIFEEYEFDSLFKSPVAVFVPFTKSYKGEMRTISGKDEDIDIVRGNSDSTNSTSSESKNA 177

  Fly   153 ------------VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 205
                        |:|||...:..:|:.:|.....|:.:||:.||.||..|.:.|:.|.|:...  
Yeast   178 QDSGSDYHDFQLVIDSGFNCTWIIPVLKGIPYYKAVKKLDIGGRFLTGLLKETLSFRHYNMMD-- 240

  Fly   206 EREIVRDIKEK--------------------LCYVALDFEQEMATAAASTSLEKSYELP-DGQVI 249
            |..:|.:|||:                    |.||..||:........:...| :..|| |.|:|
Yeast   241 ETILVNNIKEQCLFVSPVSYFDSFKTKDKHALEYVLPDFQTSFLGYVRNPRKE-NVPLPEDAQII 304

  Fly   250 TIGNERFRTPEALFQPSFLGMESCGIHETVYQSIMKCDVDIRKDLYANNVLSGGTTMYPGIADRM 314
            |:.:|.|..||..|.|....:...||.|.:.:|:......:|..:..|.|.:||....|..|.|:
Yeast   305 TLTDELFTIPETFFHPEISQITKPGIVEAILESLSMLPEIVRPLMVGNIVCTGGNFNLPNFAQRL 369

  Fly   315 QKEITALAPS--TIKIKIIAPPERKYSV--WIGGSILASLSTFQQMWISKQEYDESGP 368
            ..|:....|:  |..:.:   ||...::  |...|..|...::::..::::||.|.||
Yeast   370 AAELQRQLPTDWTCHVSV---PEGDCALFGWEVMSQFAKTDSYRKARVTREEYYEHGP 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_001262200.1 PTZ00281 1..376 CDD:173506 98/448 (22%)
ARP6NP_013186.1 ACTIN 3..433 CDD:214592 97/447 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.861654 Normalized mean entropy S1456
OMA 1 1.010 - - QHG54227
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.870

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