DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act79B and ARP8

DIOPT Version :9

Sequence 1:NP_001262200.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_568836.2 Gene:ARP8 / 835717 AraportID:AT5G56180 Length:471 Species:Arabidopsis thaliana


Alignment Length:374 Identity:105/374 - (28%)
Similarity:177/374 - (47%) Gaps:63/374 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDCYVGDEAQSKRGILSLKY-P 71
            ::::|.|||.||.|::...:|                                |.|....|:: .
plant   135 SIIIDGGSGYCKFGWSKYASP--------------------------------SGRSATFLEFGN 167

  Fly    72 IEHGIITNWDDMEKVWHHTFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFET-- 127
            ||..|......    :..|.:..::|.|...|:::: .||       :.||:|.::...:|..  
plant   168 IESPIYARLQQ----FFATIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLF 227

  Fly   128 -FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYL 190
             .|.||:....||||:|||:.||:|||::.|..|...:||..|..:.. .:..:......||.:|
plant   228 DMNVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFL 292

  Fly   191 MKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNER 255
            .:.:.|...||.:.   ..||.:||||||||||::.|:     |...:.|.|:......|:..||
plant   293 KEKMQENNISFQSL---YTVRTLKEKLCYVALDYKAEL-----SKDTQASVEVSGEGWFTLSKER 349

  Fly   256 FRTPEALFQPSFLGMESCGIHETVYQSIMKCD-VDIRKD--LYANNVLSGGTTMYPGIADRMQKE 317
            |:|.|.||||...||.:..:|:.|...:..|| ..:..|  .:...||:||:...||:::|:::|
plant   350 FQTGEILFQPRLAGMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERLERE 414

  Fly   318 ITALAPSTIK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEY 363
            :....||:|.  |::|.||....:.|.|..::::||.|...| |:::::
plant   415 LQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQF 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_001262200.1 PTZ00281 1..376 CDD:173506 105/374 (28%)
ARP8NP_568836.2 F-box-like 43..83 CDD:289689
ACTIN 136..462 CDD:214592 105/370 (28%)
NBD_sugar-kinase_HSP70_actin <182..463 CDD:302596 91/289 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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