DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act79B and ARP6

DIOPT Version :9

Sequence 1:NP_001262200.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_566861.1 Gene:ARP6 / 823150 AraportID:AT3G33520 Length:421 Species:Arabidopsis thaliana


Alignment Length:430 Identity:131/430 - (30%)
Similarity:210/430 - (48%) Gaps:70/430 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ASALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR------HQGVMVGMGQKDCYVGDEAQSKRG 64
            ::.:|:|||.|:.|||..|:..|..|.|:.:.:|.      |...:..:       .||......
plant     2 SNIVVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTTL-------SDEIDLTSA 59

  Fly    65 ILSLKYPIEHGIITNWDDMEKVWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 129
              :::.||:.|.:.|.|...::|.|.|.:.|.:||....:|||||||:..:.:....:::||.|.
plant    60 --AVRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFG 122

  Fly   130 SPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 184
            ..::|:| .|:::.||.:.|         ...:|:|.|...:|.||:...:.|.|||.|:||.|:
plant   123 FSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGK 187

  Fly   185 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKS-YELPDGQV 248
            ..|:||.::::.|  |.....|..:|.|.|||||:|:||..:::..|....:|.|| |.||||..
plant   188 AFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNGNTLIKSTYVLPDGVT 250

  Fly   249 ITIG------------------------------------------NERFRTPEALFQPSFLGME 271
            .|.|                                          ||||..||.||||:.|||.
plant   251 HTKGYVKDPQAAKRFLSLSEKESVVVMDKVGERKKADMNKNEIDLTNERFLVPETLFQPADLGMN 315

  Fly   272 SCGIHETVYQSIMKCDVDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPER 336
            ..|:.|.:.::|..|...::..||.:.:|:||:|::|.:.:|::.|:..|.|....:||....:.
plant   316 QAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDP 380

  Fly   337 KYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            ...||.|||:|||...|:.|.::|.||:|.|.....|:.|
plant   381 ILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRRRFF 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_001262200.1 PTZ00281 1..376 CDD:173506 130/428 (30%)
ARP6NP_566861.1 ACTIN 3..420 CDD:214592 130/427 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54227
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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