DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act79B and Actl11

DIOPT Version :9

Sequence 1:NP_001262200.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_080614.1 Gene:Actl11 / 67722 MGIID:1914972 Length:1207 Species:Mus musculus


Alignment Length:379 Identity:148/379 - (39%)
Similarity:225/379 - (59%) Gaps:27/379 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCDEEAS------ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDCYVGDEA 59
            :|:..:|      |:|:|.|:|..|.|.|.::...:|.||.|...:|.    ..||....|.:..
Mouse   847 LCNRSSSPYQKMAAIVIDTGTGFTKCGLAQENHVLSVVPSQVQMLQHP----PQGQPQYVVPEHQ 907

  Fly    60 QSKRGILSLKYPIEHGIITNWDDMEKVWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
            :....:|:      .|::::||.:|.:|.|.||.:|:|.|||..||:.::|::|:.||||:.:|:
Mouse   908 EGSYSVLN------RGVVSDWDALEVLWQHLFYCKLKVQPEEMAVLVADSPISPRTNREKVAEIL 966

  Fly   125 FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 189
            ||.|:.|||....||:|:|||.|||||:|:.||.|.|:..||..|...|....|||:||.|||||
Mouse   967 FERFHVPAMQTVHQALLTLYAYGRTTGLVVGSGHGTSYVAPIITGDLAPIDTYRLDVAGADLTDY 1031

  Fly   190 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNE 254
            |.::|...|:|.   .:..|:|.|||..||||:|...|||...:...::  :.|||..|||:|:|
Mouse  1032 LTQLLLSGGHSL---PKGGIIRQIKEACCYVAMDTATEMARNQSQVQVD--FVLPDKHVITLGSE 1091

  Fly   255 RFRTPEALFQPSFLGMESCGIHETVYQSIMKCDVDIRKDLYANNVLSGGTTMYPGIADRMQKEIT 319
            ||..|||||||:.||:...|:.:....||.:.:|..::.|.||.||.||:|:..|..:||::|  
Mouse  1092 RFCCPEALFQPNLLGLNQLGLPQLALLSINRLEVKQQEQLLANVVLEGGSTLINGFPERMRQE-- 1154

  Fly   320 ALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHR 373
             |.|..   .::..|.|..:.|:||||:|...:||.:|::::||:|.||..|::
Mouse  1155 -LGPGA---TVLGSPHRAVAAWLGGSIMACRDSFQSLWLTRREYEEEGPWAVYK 1204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_001262200.1 PTZ00281 1..376 CDD:173506 148/379 (39%)
Actl11NP_080614.1 Actin 860..1205 CDD:278451 146/366 (40%)
NBD_sugar-kinase_HSP70_actin 860..1204 CDD:302596 146/364 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.