DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act79B and actl6b

DIOPT Version :9

Sequence 1:NP_001262200.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_005170633.1 Gene:actl6b / 553775 ZFINID:ZDB-GENE-050522-191 Length:426 Species:Danio rerio


Alignment Length:431 Identity:159/431 - (36%)
Similarity:229/431 - (53%) Gaps:73/431 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEASALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDCYVGDEAQSKRGI--- 65
            :|..|||.|.||...:||:||:|.|:|.||:.:|....:     .|..|..|..|:.|.|..   
Zfish     9 DEVGALVFDIGSFSTRAGYAGEDCPKADFPTTIGVNAEE-----EGPADMGVEQESNSGRSYYID 68

  Fly    66 ----------LSLKYPIEHGIITNWDDMEKVWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
                      :.|..|:::|:|.:||..:.:..|.:...::..|..||||::|||.|.:|.|||:
Zfish    69 TTALHVPRAGVELISPLKNGMIEDWDAFQAIIDHIYSKHIKSEPGLHPVLMSEAPWNSRAKREKL 133

  Fly   121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT--VPIYEGYALPHAILRLDLAG 183
            |:::||.:|.||.::...|||:.:|:||.||:||||  |.:||  :|:::||.|...|::..|||
Zfish   134 TELIFEHYNIPAFFLCKTAVLTAFANGRATGLVLDS--GATHTTAIPVHDGYVLQQGIVKSPLAG 196

  Fly   184 RDLTDYL----------MKILTERGYSFTTTAEREIVRD-------IKEKL-----------C-Y 219
                |::          |.|.|...|..   |.:|.||:       .|:||           | .
Zfish   197 ----DFISMQCRELFQEMNIDTVPSYMI---ASKEPVREGAPAMWTKKDKLPPVSKSWHTFMCNE 254

  Fly   220 VALDFEQEMATAAASTSLEK--------SYELPDGQVITIGNERFRTPEALFQPS----FLGMES 272
            |..||:..:...:.|...|:        .||:|.|.....|.||.|.||.||.||    ..|...
Zfish   255 VIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPSGYSTDFGAERLRIPEGLFDPSNVKGLSGNTM 319

  Fly   273 CGIHETVYQSIMKCDVDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIA---PP 334
            .|:...|..||..||:|||..||.:.:::||.|:..|..:|:.:|::..||.::::|:||   ..
Zfish   320 LGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTERLNRELSQKAPPSMRLKLIACNSSI 384

  Fly   335 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 375
            ||::|.||||||||||.||||||||||||||.|...|.|||
Zfish   385 ERRFSSWIGGSILASLGTFQQMWISKQEYDEGGKQSVERKC 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_001262200.1 PTZ00281 1..376 CDD:173506 159/431 (37%)
actl6bXP_005170633.1 NBD_sugar-kinase_HSP70_actin 10..425 CDD:302596 157/428 (37%)
Actin 11..426 CDD:278451 158/429 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.