DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act79B and actr2a

DIOPT Version :9

Sequence 1:NP_001262200.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_021326108.1 Gene:actr2a / 406820 ZFINID:ZDB-GENE-040426-2894 Length:399 Species:Danio rerio


Alignment Length:392 Identity:177/392 - (45%)
Similarity:252/392 - (64%) Gaps:21/392 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DEEASALVV-DNGSGMCKAGFAGDDAPRAVFPSIVGRP-RHQGVMVG------MGQKDCYVGDEA 59
            |.:...:|| |||:|..|.|:||.:.|..:||::|||| ......||      ..:.|..|||||
Zfish     2 DSQGKKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTAKVGNIEIKDYRRMDLMVGDEA 66

  Fly    60 QSKRGILSLKYPIEHGIITNWDDMEKVWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQI 123
            ...|.:|.:.||:|:||:.|||||:.:|.:||..| |.:......:||||.|:||..||||:.::
Zfish    67 SELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDSRNCKILLTEPPMNPTKNREKIIEV 131

  Fly   124 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 188
            ||||:....:|:||||||:|||.|..||:|:||||||:|..|:|||::|||...|||:||||:|.
Zfish   132 MFETYQFSGVYIAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITR 196

  Fly   189 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGN 253
            ||:|:|..|||:|..:|:.|.||.:|||||||..:.|||...|..:|.|.:||.||||:||.:|.
Zfish   197 YLIKLLLLRGYAFNHSADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRVIKVGG 261

  Fly   254 ERFRTPEALFQPSFLGMESCGIHETVYQSIMKCDVDIRKDLYANNVLSGGTTMYPGIADRMQKEI 318
            |||..|||||||..:.:|..|:.|.::.:|...|:|.|.:.|.:.|||||:|||||:..|:::|:
Zfish   262 ERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRAEFYKHIVLSGGSTMYPGLPSRLEREL 326

  Fly   319 TAL-----------APSTIKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESGPGIV 371
            ..|           ..|..||:|..||.||:.|::||::||. :......|::::||.|.|..::
Zfish   327 KQLYLERVLKGDVDKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTREEYQEKGTRVL 391

  Fly   372 HR 373
            .:
Zfish   392 EK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_001262200.1 PTZ00281 1..376 CDD:173506 177/392 (45%)
actr2aXP_021326108.1 ACTIN 6..393 CDD:214592 176/386 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.