DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act79B and Actl6a

DIOPT Version :9

Sequence 1:NP_001262200.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001034122.1 Gene:Actl6a / 361925 RGDID:1307747 Length:429 Species:Rattus norvegicus


Alignment Length:423 Identity:150/423 - (35%)
Similarity:226/423 - (53%) Gaps:54/423 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEASALVVDNGSGMCKAGFAGDDAPRAVFPSIVG--RPRHQGVMV--------GMGQKDCYVGDE 58
            :|..|||.|.||...:||:||:|.|:..||:.:|  ..|..|..:        ..|....|:...
  Rat     9 DEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGVVLERDDGSTMMEIDGDKGKQGGPTYYIDTN 73

  Fly    59 A-QSKRGILSLKYPIEHGIITNWDDMEKVWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
            | :..|..:....|:::|::.:||..:.:..||:...::.....||||::|||.|.:|.|||:|:
  Rat    74 ALRVPRESMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTE 138

  Fly   123 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT--VPIYEGYALPHAILRLDLAGRD 185
            :|||.::.||.::...|||:.:|:||:||::|||  |.:||  :|:::||.|...|::..|||..
  Rat   139 LMFEHYSIPAFFLCKTAVLTAFANGRSTGLILDS--GATHTTAIPVHDGYVLQQGIVKSPLAGDF 201

  Fly   186 LTDYLMKILTERGYSFT---TTAEREIVRD-------IKEKL-------------CYVALDFEQE 227
            :|....::..|......   ..|.:|.||:       .||||             | |..||:..
  Rat   202 ITMQCRELFQEMNIELIPPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNC-VIQDFQAS 265

  Fly   228 MATAAASTSLEK--------SYELPDGQVITIGNERFRTPEALFQPS----FLGMESCGIHETVY 280
            :...:.||..|:        .||.|:|.....|.||.:.||.||.||    ..|....|:...|.
  Rat   266 VLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPSNVKGLSGNTMLGVSHVVT 330

  Fly   281 QSIMKCDVDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIA---PPERKYSVWI 342
            .|:..||:|||..||.:.:::||.|:.....||:.:|::...|.::::|:||   ..||::|.||
  Rat   331 TSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWI 395

  Fly   343 GGSILASLSTFQQMWISKQEYDESGPGIVHRKC 375
            ||||||||.||||||||||||:|.|...|.|||
  Rat   396 GGSILASLGTFQQMWISKQEYEEGGKQCVERKC 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_001262200.1 PTZ00281 1..376 CDD:173506 150/423 (35%)
Actl6aNP_001034122.1 Actin 11..429 CDD:394979 149/421 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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