DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act79B and Arp2

DIOPT Version :9

Sequence 1:NP_001262200.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster


Alignment Length:387 Identity:180/387 - (46%)
Similarity:251/387 - (64%) Gaps:20/387 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV-MVG------MGQKDCYVGDEAQSKRG 64
            :.:|.|||:|..|.|:||.:.|..:|||:||||..:.| .:|      :...|..|||||...|.
  Fly     7 NVIVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEASQLRS 71

  Fly    65 ILSLKYPIEHGIITNWDDMEKVWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
            :|.:.||:|:|::.|||||..||.:|| ..::.:.|....:||||.|:||..|||||.::|||.:
  Fly    72 LLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNREKMIEVMFEKY 136

  Fly   129 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
            ...:.|:||||||:|||.|..:|:|:||||||:|..|:||.:||||...|||:||||:|.||:|:
  Fly   137 GFDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKL 201

  Fly   194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRT 258
            |..|||:|..:|:.|.||.:||||||:..|.|.|...|..:|.|.:||.||||:||.:|.|||..
  Fly   202 LLLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERFEA 266

  Fly   259 PEALFQPSFLGMESCGIHETVYQSIMKCDVDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAP 323
            |||||||..:.:|..||.|..:.:|...|:|||.:||.:.|||||:|||||:..|:::||..|..
  Fly   267 PEALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYL 331

  Fly   324 STI-----------KIKIIAPPERKYSVWIGGSILASLSTFQQ-MWISKQEYDESGPGIVHR 373
            ..:           ||:|..||.||..|:|||::||.::..:. .|:|||||.|.|..::.:
  Fly   332 ERVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_001262200.1 PTZ00281 1..376 CDD:173506 180/387 (47%)
Arp2NP_001259621.1 ACTIN 6..393 CDD:214592 180/385 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467759
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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