DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act79B and actr6

DIOPT Version :10

Sequence 1:NP_524210.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_955990.1 Gene:actr6 / 324822 ZFINID:ZDB-GENE-030131-3543 Length:396 Species:Danio rerio


Alignment Length:408 Identity:116/408 - (28%)
Similarity:193/408 - (47%) Gaps:56/408 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDCYVGDEAQSKRGILSLKYP 71
            |.||:|||:...|.|::.:..  :|.|:...|.:...:......:    .||.:...|:..: .|
Zfish     2 STLVLDNGAYFAKIGYSHEKV--SVIPNSQFRTKTSRLKTFTANQ----LDEIKDPSGLFYI-LP 59

  Fly    72 IEHGIITNWDDMEKVWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 135
            .:.|.:.|||...|||.|.|..|: :|...:..:::||...|..:.:|.|.:|:||.:.      
Zfish    60 FQKGYLVNWDVQRKVWDHLFGKEMFKVDFADTNIVITEPYFNFCSIQESMNEILFEEYQ------ 118

  Fly   136 AIQAVLSLYASGRTTG------------IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 188
             .|:.|.:.|...:..            ||:|||...:|.||...|..:...|.|:::.|:.||:
Zfish   119 -FQSALRINAGSLSAHRYFHENNSELCCIVVDSGFSFTHIVPYCRGRKMKGGICRINVGGKLLTN 182

  Fly   189 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---AASTSLEKSYELPD----- 245
            :|.:|::.|  ......|..::..:||.:|||:.||.::|..|   ....::.|.|.|||     
Zfish   183 HLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYKDMEIAQLKGEDNTVMKDYVLPDFSSIK 245

  Fly   246 -------------------GQVITIGNERFRTPEALFQPSFLGMESCGIHETVYQSIMKCDVDIR 291
                               .|::.:.||||..||.||.||.:|::..||.|.:..||.....:::
Zfish   246 KGFCKPLEEMNFTGKYKTGEQILRLTNERFAVPEMLFHPSDIGIQEMGIPEALVNSINNMPEEMQ 310

  Fly   292 KDLYANNVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
            ...|.|.||:||.|::||..||:.||:.||||....:.::.|.......|.||.:||....|::|
Zfish   311 PHFYKNIVLTGGNTLFPGFRDRVYKEVRALAPVEYDVSVVLPNNPICYSWEGGKLLAENPDFEEM 375

  Fly   357 WISKQEYDESGPGIVHRK 374
            .:::.:|:|:|..|...|
Zfish   376 AVTRDDYEENGHYICEEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_524210.1 ASKHA_NBD_actin 7..371 CDD:466823 114/403 (28%)
actr6NP_955990.1 ASKHA_NBD_Arp6 3..386 CDD:466816 112/398 (28%)

Return to query results.
Submit another query.