DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act79B and actr6

DIOPT Version :9

Sequence 1:NP_001262200.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_955990.1 Gene:actr6 / 324822 ZFINID:ZDB-GENE-030131-3543 Length:396 Species:Danio rerio


Alignment Length:408 Identity:116/408 - (28%)
Similarity:193/408 - (47%) Gaps:56/408 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDCYVGDEAQSKRGILSLKYP 71
            |.||:|||:...|.|::.:..  :|.|:...|.:...:......:    .||.:...|:..: .|
Zfish     2 STLVLDNGAYFAKIGYSHEKV--SVIPNSQFRTKTSRLKTFTANQ----LDEIKDPSGLFYI-LP 59

  Fly    72 IEHGIITNWDDMEKVWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 135
            .:.|.:.|||...|||.|.|..|: :|...:..:::||...|..:.:|.|.:|:||.:.      
Zfish    60 FQKGYLVNWDVQRKVWDHLFGKEMFKVDFADTNIVITEPYFNFCSIQESMNEILFEEYQ------ 118

  Fly   136 AIQAVLSLYASGRTTG------------IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 188
             .|:.|.:.|...:..            ||:|||...:|.||...|..:...|.|:::.|:.||:
Zfish   119 -FQSALRINAGSLSAHRYFHENNSELCCIVVDSGFSFTHIVPYCRGRKMKGGICRINVGGKLLTN 182

  Fly   189 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---AASTSLEKSYELPD----- 245
            :|.:|::.|  ......|..::..:||.:|||:.||.::|..|   ....::.|.|.|||     
Zfish   183 HLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYKDMEIAQLKGEDNTVMKDYVLPDFSSIK 245

  Fly   246 -------------------GQVITIGNERFRTPEALFQPSFLGMESCGIHETVYQSIMKCDVDIR 291
                               .|::.:.||||..||.||.||.:|::..||.|.:..||.....:::
Zfish   246 KGFCKPLEEMNFTGKYKTGEQILRLTNERFAVPEMLFHPSDIGIQEMGIPEALVNSINNMPEEMQ 310

  Fly   292 KDLYANNVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 356
            ...|.|.||:||.|::||..||:.||:.||||....:.::.|.......|.||.:||....|::|
Zfish   311 PHFYKNIVLTGGNTLFPGFRDRVYKEVRALAPVEYDVSVVLPNNPICYSWEGGKLLAENPDFEEM 375

  Fly   357 WISKQEYDESGPGIVHRK 374
            .:::.:|:|:|..|...|
Zfish   376 AVTRDDYEENGHYICEEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_001262200.1 PTZ00281 1..376 CDD:173506 116/408 (28%)
actr6NP_955990.1 ACTIN 2..394 CDD:214592 116/408 (28%)
COG5277 2..393 CDD:227602 115/406 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54227
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.930

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