DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act79B and Actrt1

DIOPT Version :9

Sequence 1:NP_001262200.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001013983.1 Gene:Actrt1 / 302796 RGDID:1359559 Length:376 Species:Rattus norvegicus


Alignment Length:369 Identity:181/369 - (49%)
Similarity:242/369 - (65%) Gaps:3/369 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDCYVGDEAQSKRGILSLKYPI 72
            |::.|||||:||.|.:|:..||.|..|:||.|:.........:|..:||:|||.....|.|.|||
  Rat    11 AVIFDNGSGLCKVGISGEIVPRHVINSVVGHPKFNIPSARSNRKRYFVGEEAQCMYDGLYLHYPI 75

  Fly    73 EHGIITNWDDMEKVWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 137
            |.|::|.||||||:|...|..||.|.|.|.||.:||..|||:..|||.|:||||.||.||:|:..
  Rat    76 ERGLVTRWDDMEKLWKDLFEWELGVKPNEQPVFMTEPSLNPRETREKTTEIMFEKFNVPALYLCN 140

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            .||.:|.||...||:||||||||:.||||||||:||.||.:|.:||||:|::|.::|..:||:|.
  Rat   141 HAVGALCASACITGLVLDSGDGVTCTVPIYEGYSLPRAITKLYVAGRDITEHLTRLLLAKGYTFP 205

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRTPEALFQPSF 267
            ....:.:|.|||||||.|:...:........|.|   .|:||||..|.:.:...:.||.||.|..
  Rat   206 CILNKAVVDDIKEKLCTVSWGSKDSEKCYQRSLS---EYKLPDGNTIQMSDHLCQVPEVLFTPEH 267

  Fly   268 LGMESCGIHETVYQSIMKCDVDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIA 332
            ||:...||.:.|..||||||.||:::|:|..|||||||::||:.||:.||:..||.....|||.|
  Rat   268 LGIHDLGISKMVCNSIMKCDTDIQENLFAEIVLSGGTTLFPGLQDRLLKELEVLAFEGTPIKITA 332

  Fly   333 PPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            .|:|.||.|||||::.||:||:|||::.:::.|.|..:|.||||
  Rat   333 SPDRCYSAWIGGSVMTSLTTFKQMWVTAEDFKEYGAFVVQRKCF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_001262200.1 PTZ00281 1..376 CDD:173506 179/367 (49%)
Actrt1NP_001013983.1 ACTIN 9..376 CDD:214592 179/367 (49%)
NBD_sugar-kinase_HSP70_actin 11..376 CDD:302596 179/367 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.910

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