DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act79B and Actl9b

DIOPT Version :9

Sequence 1:NP_001262200.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001013915.1 Gene:Actl9b / 292516 RGDID:1359476 Length:411 Species:Rattus norvegicus


Alignment Length:373 Identity:154/373 - (41%)
Similarity:232/373 - (62%) Gaps:11/373 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-RPRHQGVMVGMGQKDCYVGDEAQSKRGILSLKY 70
            |.:|:|.|:|:||.||||...|..:..:||| :|:.:..| ...:.:.::| ||...|..|:|.:
  Rat    45 SGVVIDMGTGICKMGFAGQTRPTYIVRNIVGCQPKRRTTM-EQPKMEMFIG-EAAHARPELTLMH 107

  Fly    71 PIEHGIITNWDDMEKVWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 135
            |:.:||:.:|:..|.:|.|...|:||:..::||:|.|:.|.||.:||||:.::.||:.:|||:||
  Rat   108 PVRNGIVVDWEAAEFIWRHILENDLRLDTQDHPLLFTDPPFNPASNREKLVEVAFESLHSPAIYV 172

  Fly   136 AIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM-KILTERGY 199
            |.|:|||:||:||..|:|:|:|.|||:|||:::||.||..|.|:||||..||.:|. |||..   
  Rat   173 ASQSVLSVYANGRVNGLVVDTGHGVSYTVPVFQGYNLPSGIQRMDLAGHYLTKFLAEKILRS--- 234

  Fly   200 SFTTTAE-REIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRTPEALF 263
            ||....| .:.:.:||::.|||||||::|.  ........:..:|||||:||:|.|.|:.||.||
  Rat   235 SFAVKKEDMDTMENIKQQYCYVALDFQKEQ--GRPDEKFRRCLKLPDGQMITVGKELFQCPELLF 297

  Fly   264 Q-PSFLGMESCGIHETVYQSIMKCDVDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTIK 327
            . |...|..|.|:...|..|:.....::|.|:..|.:|.||::::.|...|.:.|:.........
  Rat   298 HPPDTSGPSSLGLPSMVEHSLSTVPQELRADMEQNVLLCGGSSLFTGFEGRFKTELLRRLGPEAH 362

  Fly   328 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 375
            :.::|...|..||||||||||||..||..|:.:::|:|.||.||.|||
  Rat   363 VVVVAQANRNLSVWIGGSILASLCAFQTRWVLREQYEEHGPDIVLRKC 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_001262200.1 PTZ00281 1..376 CDD:173506 154/373 (41%)
Actl9bNP_001013915.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
NBD_sugar-kinase_HSP70_actin 45..410 CDD:302596 152/371 (41%)
Actin 47..411 CDD:278451 153/371 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

Return to query results.
Submit another query.