DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act79B and arp1

DIOPT Version :10

Sequence 1:NP_524210.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_596704.1 Gene:arp1 / 2539676 PomBaseID:SPBC1347.12 Length:379 Species:Schizosaccharomyces pombe


Alignment Length:369 Identity:177/369 - (47%)
Similarity:258/369 - (69%) Gaps:2/369 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDCYVGDEAQSKRGILSLKYPIE 73
            :.:|||||..||||||||.|:.:||:.|||.:|:.||....|||.:||.|||:.||:|.::.|||
pombe    12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQRPIE 76

  Fly    74 HGIITNWDDMEKVWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 137
            .|||.||.|||::|.:.:.: :|...|||||:||||.||....|:||:.:..:||.|.||:..::
pombe    77 RGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSL 141

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            |.||:||||.|||||||:.|||::|:||||:|:::|.||.:.::.|||:||||...|.:.|:...
pombe   142 QPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELV 206

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRTPEALFQPSF 267
            ::||:||||:||||.||||.||..|:.:.........:|:|||.|.||:|.|.|..||.||.|..
pombe   207 SSAEKEIVREIKEKCCYVASDFRSEIESWTEHKPQIHTYQLPDNQTITLGTECFSAPEVLFNPEM 271

  Fly   268 LGMESCGIHETVYQSIMKCDVDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIA 332
            :|.|:.|:|..:::||:..|:|:|..||:|.|||||:|:..|..:|...|:.|::....::||.|
pombe   272 MGSEASGLHIQLFKSILLSDIDLRSTLYSNIVLSGGSTLLRGFGERFISELRAISGKKNQVKIYA 336

  Fly   333 PPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            .|||.::.|:|||||||||||:::.|:.:|| ::...::.|:.|
pombe   337 SPERMHNAWLGGSILASLSTFRRLLITSEEY-KNDQNVIFRRRF 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_524210.1 ASKHA_NBD_actin 7..371 CDD:466823 175/362 (48%)
arp1NP_596704.1 ASKHA_NBD_Arp1 9..379 CDD:466820 176/367 (48%)

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