DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act79B and arp6

DIOPT Version :9

Sequence 1:NP_001262200.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_588104.1 Gene:arp6 / 2539564 PomBaseID:SPCC550.12 Length:401 Species:Schizosaccharomyces pombe


Alignment Length:404 Identity:112/404 - (27%)
Similarity:182/404 - (45%) Gaps:51/404 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDCYVGDEAQSKRGILSLKYPIE 73
            :|:|||:...||||||...  ...|:.:.|.:.       |.: .::|:|..:.....:|::...
pombe     8 IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTLQFRRA 62

  Fly    74 H--GIITNWDDMEKVWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMY 134
            |  |.:.:|.....||.....|...:.|.  ::.:|||:......:......|::||.|...|..
pombe    63 HEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLVFEEFQFDAYL 127

  Fly   135 VAIQAVLSLYASGRTT--------------GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 185
            ....|.|..:..|..|              .:|:|||...:|.:|:.:......|:.|:|:.|:.
pombe   128 PCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKL 192

  Fly   186 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA--AASTSLEKSYELPD--- 245
            ||:||.::::.|.|:.  ..|..||.:|||.:|||:.:|:::|...  ...:.||..|.|||   
pombe   193 LTNYLKEVISYRKYNM--MEETYIVNEIKESVCYVSQNFKEDMEICHEKPRSKLEICYALPDYST 255

  Fly   246 ---------------GQVITIGNERFRTPEALFQPSFLGMESCGIHETVYQSIMKCDVDIRKDLY 295
                           .||:.:.||||..||.||.||.:.:...||.|.|.||:.....:|:..|.
pombe   256 GKHGYIVRDINQKIEQQVLNLSNERFMIPELLFSPSDIEIREAGIPEAVMQSVTHFPENIQAMLL 320

  Fly   296 ANNVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360
            .|.|..||...:||...|:..|:.:|||:..::|:..|.:.....|...|.: .|..:....|::
pombe   321 ENVVTIGGNCKFPGFHKRLSSELRSLAPANWEVKVFEPSDPICFPWKKASHM-PLEHWNANKITR 384

  Fly   361 QEYDESGPGIVHRK 374
            .||.|.|..|:.||
pombe   385 SEYSEHGANIMTRK 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_001262200.1 PTZ00281 1..376 CDD:173506 112/404 (28%)
arp6NP_588104.1 COG5277 1..399 CDD:227602 112/404 (28%)
ACTIN 6..400 CDD:214592 112/404 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54227
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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