DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act79B and arp-11

DIOPT Version :9

Sequence 1:NP_001262200.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_501314.2 Gene:arp-11 / 183628 WormBaseID:WBGene00016793 Length:384 Species:Caenorhabditis elegans


Alignment Length:405 Identity:87/405 - (21%)
Similarity:156/405 - (38%) Gaps:96/405 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDCYVGDEAQSKRGILSLKYPIEHGIITNWD 81
            |.:.|.||:..||.:.                  :..||.||.:               :||: |
 Worm     1 MFRIGCAGEITPRHII------------------RTEYVDDEGK---------------LITS-D 31

  Fly    82 DM------------EKVWHHTFYNELRV------APEEHPVLLTEAPLNPKANREKMTQIMFETF 128
            ::            .:.:....|..||:      ||.:.||:..|:....::.|..:|:|:.|..
 Worm    32 ELLALNNRKTATKSTEYYEEILYKFLRIVFLKVLAPTDRPVIFVESIFMSESLRNTITKIVVEKI 96

  Fly   129 NSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI-LRLDLAGRDLTDYLMK 192
            ...::......|.:.:.......:|:|.|......|||.||..:.:.. ....:.||.|...:.:
 Worm    97 RCKSLMFMPSHVCATFPFNTQNALVVDIGHSECIAVPIIEGVTMLNEFESARSICGRQLERRVRE 161

  Fly   193 ILTERGYSFTTTAEREIV-----RDIKE-------KLCYVALDFEQEMATAAASTSLEKSYELPD 245
            .:.:.|.......||..:     :||..       .|..:.||.|:    |...|..|.|.|...
 Worm   162 QMEKYGQIAELNGERRAITENDWQDIDACKLIETLSLSLICLDKER----AENWTKWEASEEGEK 222

  Fly   246 GQVITIGNER--------FRTPEALFQPS---FLGME------SCGIHETVYQSIMKCDVDIRKD 293
            ..:.|:..||        |..|..:|:.|   |....      ...:.:.:::.:.||.:|:||.
 Worm   223 PDIETLCKERLFPNNGKIFVVPPVVFETSTEIFFNENLNPTSFDLSLPKLLHKLVSKCPIDLRKK 287

  Fly   294 LYANNVLSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP----PERK----YSVWIGGSILAS 349
            |:.|.:|:||.:..||:..|:::||..: ..:..||.:|..    .|.|    :..|:|.|:|.|
 Worm   288 LFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGASLLGS 352

  Fly   350 L-STFQQMWISKQEY 363
            | .|.::..::.:|:
 Worm   353 LRETIERKSLTLEEW 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_001262200.1 PTZ00281 1..376 CDD:173506 87/405 (21%)
arp-11NP_501314.2 NBD_sugar-kinase_HSP70_actin 3..368 CDD:302596 86/403 (21%)
ACTIN 3..367 CDD:214592 85/401 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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