DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act79B and arp-1

DIOPT Version :9

Sequence 1:NP_001262200.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_497108.2 Gene:arp-1 / 175162 WormBaseID:WBGene00013168 Length:374 Species:Caenorhabditis elegans


Alignment Length:369 Identity:197/369 - (53%)
Similarity:266/369 - (72%) Gaps:6/369 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDCYVGDEAQSKRGILSLKYPIE 73
            :|:|||||:.||||||:..|:..|.:.||||::..||.|....|.::|.:|:|.||:.|::||:|
 Worm    11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPME 75

  Fly    74 HGIITNWDDMEKVWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAI 137
            |||:.||.||||:|.:.| .::|::.|||||||||:|||||..|||:..:|.|||||.||:|:.:
 Worm    76 HGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQM 140

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            ||||||||:|||||:||||||||:|.|||.:|:|:.|||.|:||||||:|:||..:|...||.|.
 Worm   141 QAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFH 205

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRTPEALFQPSF 267
            .:.|.||||::||..||:|||     .|...:.|::.||.|||...|.|.|..||.||.||:|..
 Worm   206 RSNEFEIVREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDL 265

  Fly   268 LGMESCGIHETVYQSIMKCDVDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIA 332
            :|.|..|:...|.|||||||||:|:.||:|.|||||||::.|..||:..|:..:||:..||:|.|
 Worm   266 IGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISA 330

  Fly   333 PPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 376
            ..||....||||||:|||.||::||:.|:||::.|...:|::.|
 Worm   331 SQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_001262200.1 PTZ00281 1..376 CDD:173506 196/367 (53%)
arp-1NP_497108.2 NBD_sugar-kinase_HSP70_actin 4..374 CDD:302596 196/367 (53%)
ACTIN 8..374 CDD:214592 196/367 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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