DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act79B and Arp6

DIOPT Version :10

Sequence 1:NP_524210.1 Gene:Act79B / 40444 FlyBaseID:FBgn0000045 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_315883.4 Gene:Arp6 / 1276525 VectorBaseID:AGAMI1_013800 Length:407 Species:Anopheles gambiae


Alignment Length:415 Identity:107/415 - (25%)
Similarity:188/415 - (45%) Gaps:76/415 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SALVVDNGSGMCKAGFAGDDAPRAVFPSIV------GRPRHQGVMVGMGQKDCYVGDEAQSKRGI 65
            :|.|:|||:...|.|.:.|..|:.:...|.      .||              ::|::.:..|..
Mosquito     5 NAFVLDNGAFYAKLGLSDDPEPKTILNCITKAKSERRRP--------------FIGNQIEECRDA 55

  Fly    66 LSLKYPI--EHGIITNWDDMEKVWHHTFYNELRVAPE-------EHPVLLTEAPLNPKANREKMT 121
            ..|.|.:  :.|.:.|||..:.||.:.|      :|:       :.|:|:||...|..:.:|.|.
Mosquito    56 SGLFYILCFQRGYLVNWDVQKTVWDYLF------SPDCCPVQFADTPLLITEPLFNFGSIQEAML 114

  Fly   122 QIMFETFNSPAM--YVAIQAVLSLYASGRTTG----------IVLDSGDGVSHTVPIYEGYALPH 174
            :|::|.::..|:  ..||......|.....|.          :|::.|...:|.||..:|..:..
Mosquito   115 EILYEEYDCDAVCKSTAIDLAAFNYTHSEQTEQPEGKRPLACVVVEMGFSFTHVVPFVKGCKVRE 179

  Fly   175 AILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---AASTS 236
            ||.|:|:.|:.||::|.:|::.|  ......|..::..:||..|:|:.:|.::|..|   ....:
Mosquito   180 AIRRIDVGGKVLTNHLKEIISYR--QLNVMDESYVINQVKEDSCFVSQNFNEDMRIARKRIPDNT 242

  Fly   237 LEKSYELPDG------------------------QVITIGNERFRTPEALFQPSFLGMESCGIHE 277
            :.:.|.|||.                        |.:.:|||||..||.||.||.:|::..|:.|
Mosquito   243 ILREYVLPDYTQIRRGFLRKPNESGGAGDGGEELQTVRLGNERFVIPEILFHPSDVGIQQMGVPE 307

  Fly   278 TVYQSIMKCDVDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWI 342
            .:..:|..|..:.|..|:||.|:.||..::||:..|:::::.||||....:.:..|.......|.
Mosquito   308 AIVDAINLCPEETRPHLFANIVVCGGCALFPGMQSRVERDVRALAPDEYDVNVTVPENPITYAWH 372

  Fly   343 GGSILASLSTFQQMWISKQEYDESG 367
            ||...:...:|.:..:|:.||:|.|
Mosquito   373 GGKKYSQSLSFMKSCMSRNEYEEYG 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act79BNP_524210.1 ASKHA_NBD_actin 7..371 CDD:466823 107/415 (26%)
Arp6XP_315883.4 ASKHA_NBD_Arp6 7..397 CDD:466816 105/411 (26%)

Return to query results.
Submit another query.