DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Chs2 and chs2

DIOPT Version :10

Sequence 1:NP_524209.3 Gene:Chs2 / 40442 FlyBaseID:FBgn0029091 Length:1393 Species:Drosophila melanogaster
Sequence 2:XP_073785914.1 Gene:chs2 / 563347 ZFINID:ZDB-GENE-060503-320 Length:1249 Species:Danio rerio


Alignment Length:1395 Identity:452/1395 - (32%)
Similarity:668/1395 - (47%) Gaps:307/1395 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DYFMRSRKQ----RDKPSLWDSFQDPPSKKTSGSDADWKKLQFCLKLFKICTY--LLVFAVVLAT 68
            |...:..||    ..:...||..::.|..:.....   ||...|||.| .||.  ||||.:.|.:
Zfish    12 DVHKKEHKQDEQKEQEQKFWDVCREVPIIQNEQMP---KKRMHCLKWF-ACTVVGLLVFILALLS 72

  Fly    69 SVFANLIYLYMAGNTGGTGPRVQVCSKYPVLRHGQVEAVASELDQIAWVWALIFAFAAPELLTFL 133
            .  .:.:.|...||                   .|.:.:.|:....| :.|:.|....|.:|..|
Zfish    73 K--TSFLLLITFGN-------------------NQTDIIHSDKKPTA-LLAIGFVLVGPNVLLLL 115

  Fly   134 RALRICMFKREQRPSGLEVGLVTLFELLHVVGLALLTFTVLPALDVTRGAILGCCVCFVPALLNL 198
            ::....:||....|:...|..|...|:|..:|.|:||...:|..|:....::...|..:.|:..:
Zfish   116 KSTWKFIFKSATMPAKKTVFWVLCVEILVALGAAVLTIVAMPHFDIVTNVMILNSVSILSAVFQV 180

  Fly   199 LTGTRVRWRSADSLVLGLSILALVAQGSV-----FLVWPSLSDSMEVQLLAIPLLLISFRWWENF 258
            :.....:.|....::..|||:.:|. |.|     :||:.| |..:.:.|.....:.:|..||||:
Zfish   181 VAECLAKERKRLIMLPVLSIIFIVL-GYVLFVVNYLVFES-SFCITIGLAIFGTICVSMNWWENY 243

  Fly   259 ANTHEAIAY--IIRTIRCTRSRYHTYLYLAPLKVLVFAGMGFILHGHEFVEYFGRFRDAWRPHLI 321
            :....::..  |.:.|..:|:..:....|..: ::..|.:|      .:|...|   |.|     
Zfish   244 STLFNSLHLKGISKDIGKSRNAVNIISSLTRI-LITSAVIG------AYVTLTG---DGW----- 293

  Fly   322 TLVQSNGDPDALLLAQANVSITAPPRRTLFTMQSSPNSVFYALAAQVGAAYLCHIFGKFACKIKI 386
                     :::.|....|.|.....:||                   ::.||..|...|||:..
Zfish   294 ---------NSVKLVFETVVIALVVIQTL-------------------SSALCRWFVVVACKMHA 330

  Fly   387 QKFSYALPLSLAGPATVCLVTFLAQLRASDPCSLHGFMP--------DYLSLLALGGSVEEL--- 440
            .:.|:.:|:..|  :.:.|..||:.|....|.|.:..:|        :::.|| |..:::.|   
Zfish   331 LRRSFFMPMYFA--SVIVLAVFLSPLVVKFPVSNYTSIPLDKSESSVEWVKLL-LADAIKTLLTR 392

  Fly   441 ---------GQRCLD-YALWLWPLWWLAQVWTCLHIWQPHNDRNAPTEKLFVCPWYCGLLVDQCS 495
                     |..||. .||:    |||..|.:.::||.....|...|:.|||...|.|..::|..
Zfish   393 DIVVNMKTEGLVCLGCSALF----WWLGLVLSTVYIWFLKIHRIERTQDLFVQRMYEGAFLEQSL 453

  Fly   496 MMNRRIVDWSEEYLAIKSDLTAPRDPVVALAADINASRDIQEEDKVPQLI---VCATMWHETEDE 557
            ::|.|        ..|:..:                     ::.|..|:|   :||||||||.||
Zfish   454 LLNTR--------FEIRKKI---------------------KDKKCAQIIRVFLCATMWHETYDE 489

  Fly   558 MMEFLKSIVRLDEDQCARRMARTHLNGGKADDEYYELETNIFFDDAFVSDPRQCQNKRNPPINEY 622
            ||:.:.|:.|||    |.| .:|    ||..|  .|.|.:::|||||..|    .|:|....|||
Zfish   490 MMKIIISMFRLD----AYR-PKT----GKHSD--IEFEFHVYFDDAFKDD----SNQRERLANEY 539

  Fly   623 VKTLTRTIDKAAFEVYGVNIRIKP-------PLK----IETPYGGRLVWTLPGRTKMVAHLKNKD 676
            |:.|...|.    |||.:.....|       ||.    |.|||||||.:|||....|:.|||:|.
Zfish   540 VEILVEVIK----EVYIIFSEEDPCVFKKMQPLPTQKIISTPYGGRLEYTLPKGNVMMVHLKDKQ 600

  Fly   677 KIRHKKRWSQVMYMYYLLGYRIME--------------TKELSPRRKAVIAENTFILALDGDIDF 727
            .|||||||||:||:||:||:|:.:              .||...|.:    |||:|||||||.||
Zfish   601 LIRHKKRWSQIMYLYYILGWRLNKQYYEKFEAGEEPDLLKEKLKRER----ENTYILALDGDTDF 661

  Fly   728 QPRAVRLLIDRMKAVDELGAACGRIHPVGRGPMVWYQRFEYAIGHWLQKATEHVIGCVLCSPGCF 792
            ||.||.|||||:|...|:|||||||||.|.|||||||:||||:||||||..|||.||||||||||
Zfish   662 QPSAVMLLIDRLKLYPEVGAACGRIHPTGTGPMVWYQKFEYAVGHWLQKTAEHVFGCVLCSPGCF 726

  Fly   793 SLFRASALMENSVMKRYTMISSEAMKMVQYDQGEDRWLCTLLLKAGSRVEYCAASDAYTHAPESF 857
            ||||.:||:|::||||||..:|||...||||||||||||||||:.|.||||.|||||||:||:.|
Zfish   727 SLFRGAALVEDNVMKRYTTKASEASHYVQYDQGEDRWLCTLLLQQGWRVEYNAASDAYTNAPQDF 791

  Fly   858 NEFYNQRRRWVPSTIANIFDILADADTVVKKNNSISTMYVWYQGMLMIGTVLGPGTIFLMMVGAL 922
            .|||||||||.|||:||..|:|.......::|:|||.:|:.||.:.|..::|||.||.||:.|:.
Zfish   792 KEFYNQRRRWGPSTMANTIDLLGSGQLTSQRNSSISKLYILYQIISMAASILGPATICLMISGSF 856

  Fly   923 VAVFSIDIWTAFLWNFFPILLFILACVYLKQKFQLLIAFVISSVYCLVMMAVLIGIIVQMLEDGP 987
            |.:|:::..||......|..::::.|..||...|:.||.::|.:|..:|...::.||..:::...
Zfish   857 VFIFNMNENTALALAIVPPTVYLILCFKLKSDTQIRIAAIMSIIYAFLMAGTILSIIGDLVKQNT 921

  Fly   988 -LAPASLFFLLVAVQITIAGFMHPQEFWALLCGVIYYITIPSMYMLLMIFSVFNMNDVSWGTREA 1051
             |.|:.||.:.:.:...|...:|||||..::.|::|:|.|||.|:||.|:|:.|||:|||||||:
Zfish   922 FLTPSGLFLIGMVMLYVITAALHPQEFSLVVYGLLYFICIPSGYLLLAIYSIVNMNNVSWGTRES 986

  Fly  1052 ------------------------PVLKDDGKDAVD-------------------EANNYLPGWL 1073
                                    |.|:.:.:.:.:                   ::.|..|   
Zfish   987 GGQTKTSAVNSLKKKFMNATCCKCPCLEYEDETSKEILPAETITKTETSQITLDIQSANVFP--- 1048

  Fly  1074 NDPLLID-------------------SELGEVSLMEQRFWKDLIKQYLKPLELSREQKQAMADGL 1119
            ..|..:|                   ||. ::|..|..||.::..:||:||..::||::.:|:.|
Zfish  1049 TSPYSLDRKPWIQRLQPKFGFWLKSKSEC-KLSTDEVSFWMEMQNKYLEPLMENKEQQEKIANDL 1112

  Fly  1120 KELRNMIAFAFVMVNAIFVLIVFLLQLKKEFLHLEWP-IDP------TDFVSFDRDNLMVGIYRQ 1177
            :||||.:.|.|...||:::...|.||...:.:.::.| |.|      |:.:|             
Zfish  1113 RELRNKVTFVFFFCNALWLAATFFLQTIGDAVSIKIPKIYPNGTHSSTETLS------------- 1164

  Fly  1178 YKELDPIGLCFVIFFGLILIIQFLAMFFHRFATLCQLLATTQVDWFRTGGQFTDEDAATELKGSA 1242
               ||||.|.|::.|.::||:|||.|.:||..||...:|.                |.||:|.. 
Zfish  1165 ---LDPIALMFLLSFAVLLIMQFLGMLYHRIYTLIHYVAY----------------ADTEIKAH- 1209

  Fly  1243 VSIARKLQRPKRLFDDDEDGDPHYDEVLMD 1272
               .::.::..::.|.:     |:.|...|
Zfish  1210 ---RKQSEQVAQIVDSN-----HHQETTED 1231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chs2NP_524209.3 Chitin_synth_C 546..874 CDD:133033 201/352 (57%)
BcsA <789..976 CDD:440828 97/186 (52%)
SLC5-6-like_sbd 903..>1055 CDD:444915 57/176 (32%)
chs2XP_073785914.1 None

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