DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chs2 and chs1

DIOPT Version :10

Sequence 1:NP_524209.3 Gene:Chs2 / 40442 FlyBaseID:FBgn0029091 Length:1393 Species:Drosophila melanogaster
Sequence 2:NP_001303255.1 Gene:chs1 / 322468 ZFINID:ZDB-GENE-030131-1188 Length:1463 Species:Danio rerio


Alignment Length:1552 Identity:440/1552 - (28%)
Similarity:654/1552 - (42%) Gaps:494/1552 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RSRKQRDKPSLWDSFQDPPSKKTSGSDADWKKLQFCLKLFKICTYLLVFAVVLATSVFA--NLIY 76
            |..:.||   .||.||..|      ..|:.:|.|.|.::.:....:||...||.:.|.:  :|:.
Zfish    11 REGRHRD---TWDPFQLNP------IGAEKEKKQVCFRILQNLVAVLVGLAVLVSGVVSKGSLLV 66

  Fly    77 LYMAGNTGGTGPRVQVCSKYPVLRHGQVEAVASELDQIAWVWALIFAFAAPELLTFLRALRICMF 141
            |     |...||:                ::..|::|..:...|:.....|.||.||:||..|:|
Zfish    67 L-----TTLAGPK----------------SLRDEVEQQFYGLLLMCVLVTPNLLMFLKALWKCVF 110

  Fly   142 KREQRPSGLEVGLVTLFELLHVVGLALLTFTVLPALDVTRGAILGCCVCFVPALLNLL--TGTRV 204
            |....|:...:|:|...|.|..:|.|:|...|:|.||:.....:...:|...|:|.:.  ..|| 
Zfish   111 KSYVAPNPRTLGIVCGIEALVALGTAMLVLIVMPNLDILTNLCIPGGICIFSAVLQIAFRLQTR- 174

  Fly   205 RWRSADSLVLGLSILALVAQGSVFLVW-----------PSLSDSME----------VQLLAIPLL 248
            ||    .::..:..|.||..| .||:.           ...||.:|          |.:.....|
Zfish   175 RW----MILYPICSLILVVSG-YFLLGIDYYVREKTYIKHFSDRLENVDDYMTYVYVGIAIFASL 234

  Fly   249 LISFRWWEN----FANTHEAIAYIIRTIRCTRSRYHTYLYLAPLKVLVFAGMGFILHGHEFVEYF 309
            |:|..||||    ..|..|.::. :.|.|.|     .|::.:.::::|...:.|:        ||
Zfish   235 LVSLNWWENPFQASTNIQEMLSE-LDTFRDT-----AYVFTSFIRIVVTLAVYFL--------YF 285

  Fly   310 GRFRDAWRPHLITLVQSNGDPDALLLA-QANVSITAPPRRTLFTMQSSPNSVFYALAAQVGAAYL 373
                       ..:..:..:.||...| ||...|..    .||.:|:      :..||       
Zfish   286 -----------FVIANNQFEWDAYTKASQATQEIAL----GLFFLQA------FCSAA------- 322

  Fly   374 CHIFGKFACKIKIQKFSYALPLSLAGPATVCL--VTFLAQLRASDPCSLHGFMPDYLSLLALGGS 436
            ||.||..||||...||.:|||:||.||||:.|  :.|:.|....:|      .|:..:::. |..
Zfish   323 CHWFGVVACKIHAMKFGFALPVSLIGPATLILGMILFVTQSAQFNP------SPEIAAIIK-GNI 380

  Fly   437 VEELGQRC------------------LDYALW---------LWPL---------WWLAQVWTCLH 465
            ..:....|                  :.|::.         :||.         .|||.|....:
Zfish   381 TNDFWPFCYELKSLSDVNTTPVVMLEISYSICKTSLNNPYEMWPFSMLALEGVCMWLALVSCTYY 445

  Fly   466 IWQPHNDRNAPTEKLFVCPWYCGLLVDQCSMMNRRIVDWSEEYLAIKSDLTAPRDPVVALAADIN 530
            ||:....|...|..|||...|....:|...::|.:          :|...||.|:          
Zfish   446 IWKIKVQRIERTSLLFVRRLYESAFIDISMLLNTK----------MKVIRTANRE---------- 490

  Fly   531 ASRDIQEEDKVPQLIVCATMWHETEDEMMEFLKSIVRLDEDQCARRMARTHLNGGKADDEY---Y 592
            ::.|.:.|:.|  :.:||||||||.|||::.|.|:.|||..:            |...:|:   :
Zfish   491 SNNDAELENCV--IYLCATMWHETYDEMLKILTSMFRLDRYR------------GDPKEEHKDCF 541

  Fly   593 ELETNIFFDDAFVSDPRQCQNKRNPPINEYVKTLTRTIDKAAFEVYGVNIRIKPP--LKIETPYG 655
            :.|.:|:.||||:.:    ::.....:|.||:.|...:    .|||.|....:|.  ..||||||
Zfish   542 DFECHIYVDDAFMIE----KDSGTKFVNTYVEDLIHVV----MEVYRVFTNKEPDEVSIIETPYG 598

  Fly   656 GRLVWTLPGRTKMVAHLKNKDKIRHKKRWSQVMYMYYLL---GYRIME----TKELSPRRKAVIA 713
            ||||:.:|....:..|||:|..||:||||||:||:||||   ||.:..    |::.:|.|.::::
Zfish   599 GRLVFVMPEGNMLYVHLKDKQLIRNKKRWSQIMYLYYLLGWKGYNVKNPQKITRQNNPCRASLVS 663

  Fly   714 ----------------------ENTFILALDGDIDFQPRAVRLLIDRMKAVDELGAACGRIHPVG 756
                                  :||:|:|||||.||.|:|:.||:||::..|.:|||||||||.|
Zfish   664 LDSETYLLPGLDNDSKRRHISDDNTYIMALDGDTDFHPKALILLVDRLRMYDNVGAACGRIHPTG 728

  Fly   757 RGPMVWYQRFEYAIGHWLQKATEHVIGCVLCSPGCFSLFRASALMENSVMKRYTMISSEAMKMVQ 821
            .|||||||:||||:||||||..|||.|.||||||||||||.||||:::|:||||..::.|.:.||
Zfish   729 MGPMVWYQKFEYAVGHWLQKTAEHVFGSVLCSPGCFSLFRGSALMDDNVLKRYTTKATRASEYVQ 793

  Fly   822 YDQGEDRWLCTLLLKAGSRVEYCAASDAYTHAPESFNEFYNQRRRWVPSTIANIFDILADADTVV 886
            ||||||||||||||:.|.||||.|||||||::|:.|.|||||||||.|||:||..|:|......|
Zfish   794 YDQGEDRWLCTLLLQQGWRVEYNAASDAYTNSPQEFKEFYNQRRRWGPSTLANTLDLLHSGKETV 858

  Fly   887 KKNNSISTMYVWYQGMLMIGTVLGPGTIFLMMVGALVAVFSIDIWTAFLWNFFPILLFILACVYL 951
            |:|.|||.:|:.||...:..::|||.::.||:.||...||.:....:.:....|.:.::|.|...
Zfish   859 KRNTSISMLYILYQIFTVASSILGPASVTLMIAGAFQFVFGVSGTLSIIIAVIPPVFYMLICFLA 923

  Fly   952 KQKFQLLIAFVISSVYCLVMMAVLIGIIVQMLEDGP-LAPASLFFLLVAVQITIAGFMHPQEFWA 1015
            |...|:.||.::|.:|..:|.|....||..|:..|. :.|..||.:..|:...:...:||||...
Zfish   924 KPNLQITIAAILSVIYAFLMTASFFAIIGDMVIQGTFITPTGLFLVSGAILYMVTAVLHPQECTL 988

  Fly  1016 LLCGVIYYITIPSMYMLLMIFSVFNMNDVSWGTRE------------------------------ 1050
            ::.|::|:|.|||.|:||.|:|:.||:.|||||||                              
Zfish   989 IIYGLMYFICIPSGYLLLTIYSLVNMHIVSWGTRESTKGKEQKKQVGVVCNRDCRMCCWDVKIQV 1053

  Fly  1051 ------------------------------------APV-------------------------L 1054
                                                ||.                         |
Zfish  1054 TQETENLLLQQMQQAVNPTAAAAAKAEPEEPATLSAAPEHSSVEISRHVQEKNMENKKDQSKENL 1118

  Fly  1055 KDDGK-----------------------------------DAVDEANNY---------------- 1068
            ..|.|                                   |..||..:|                
Zfish  1119 NKDNKERDSESERSSSSSSSEKKMDTFNDDTDYEDTDYDDDDDDEDYDYNTVEPKEVVPESAWVE 1183

  Fly  1069 ------------------------------------------LPGWLNDPL-------------- 1077
                                                      |...|||.|              
Zfish  1184 PVKREFLKKLTYANLKRNLQEQIRYTLRNKNQEDLCEELVLILTDTLNDELKDKVGPEDVLTETQ 1248

  Fly  1078 ---------------------------------------LIDSELGEVSLMEQRFWKDLIKQYLK 1103
                                                   |:..::.::|..||.||:.|:::|||
Zfish  1249 LEELQYALNEAARRIVKTNRIETGSQRVERRVKRGIERTLVAPQVEKLSEDEQDFWEKLLERYLK 1313

  Fly  1104 PLELSREQKQAMADGLKELRNMIAFAFVMVNAIFVLIVFLLQLKKEFLHLEWPIDPTDFVSFDRD 1168
            |::..:...:.:...||.|||...|.:.::|.::|:..|.||                  :...|
Zfish  1314 PIQDDKAHLEEVTRELKSLRNKAVFLYFIINVLWVVATFFLQ------------------AIGGD 1360

  Fly  1169 NLMVGIYRQYK---------ELDPIGLCFVIFFGLILIIQFLAMFFHRFATLCQLLA 1216
            .|.:.|.:.|.         .::|:.|.|::.|.::|::|||||.:||..||..:::
Zfish  1361 VLSIEIPKYYPNKTLAPEPLRVEPLSLMFLLSFAVLLVVQFLAMLYHRVYTLIHVVS 1417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chs2NP_524209.3 Chitin_synth_C 546..874 CDD:133033 179/361 (50%)
BcsA <789..976 CDD:440828 93/186 (50%)
SLC5-6-like_sbd 903..>1055 CDD:444915 54/243 (22%)
chs1NP_001303255.1 Glyco_tranf_GTA_type 505..846 CDD:472172 179/360 (50%)
Chitin_synth_2 <689..1035 CDD:367353 175/345 (51%)
SMC_N 1182..>1333 CDD:481474 18/150 (12%)

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