DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7458 and LOC303140

DIOPT Version :9

Sequence 1:NP_649374.1 Gene:CG7458 / 40441 FlyBaseID:FBgn0037144 Length:572 Species:Drosophila melanogaster
Sequence 2:XP_008765965.1 Gene:LOC303140 / 303140 RGDID:1561735 Length:555 Species:Rattus norvegicus


Alignment Length:546 Identity:163/546 - (29%)
Similarity:275/546 - (50%) Gaps:23/546 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 DAILVRIGQFGRYQIINYVLLCVPMLFNAFFSISYVFTASTVVHRCTVPQCDSPSSVYEEDWL-- 101
            |.:...:|::|.:|.:.:.||...::.|.|..:|.||..::..|||.||...:.||.:....:  
  Rat     5 DELTAFLGEWGPFQRLIFFLLSASIIPNGFTGLSAVFLTASPEHRCLVPDTVNLSSAWRNHSIPL 69

  Fly   102 ----GFTIPKKNSAWDDCHRY-AANISDAISGYTDPSGQYCLKEYFTITSETCGRDFKFRDEE-- 159
                |..:|.|      |.|| .|.|::..:...:|.....||:   :..|.|...:::..|.  
  Rat    70 EMKDGRQVPHK------CRRYRLATIANFSALGLEPGEDVDLKQ---LELENCLDGWEYSKEVFL 125

  Fly   160 KTISTEFGIYCEDEWKLSMVGTINNVGQFVGIPLGGYFADRYGRRTMLAVAGSVSALMGVIRSLS 224
            .||.||:.:.|.|.||..:..::..||..:|..:.|..:||:||:.:|.....:......::..|
  Rat   126 STIVTEWNLVCNDAWKAPLTTSMFYVGVLLGSFISGQLSDRFGRKPVLFWTMGMHTGFSFLQVFS 190

  Fly   225 SNYSMF-LVFEFLDMAVGSTLFPTAFLLAIELVGPKRRVAAATI-ITIFYALGEAFLGFLASQVQ 287
            .|:.|| |:|..:.|...|. :..||:|..|::....|:..||: |.||:|.|...|...|..::
  Rat   191 VNFEMFTLLFALVGMGHISN-YVAAFVLGTEILSKSIRIIFATLGICIFFAFGFMVLPLFAYFIR 254

  Fly   288 HWRWLLRVLYAPAVLQILFLWILPESVRWLLSQGAEEKASNVLRRAARINQRPLPEEQLNDLLTS 352
            .||.||..:..|.||.....|.:|||.|||:|||..::|..::|:||:.|....|....:...|:
  Rat   255 DWRMLLMAITLPGVLCGALWWFIPESPRWLISQGRVKEAEVIIRKAAKFNGIVAPSTIFDPSETT 319

  Fly   353 NRQKLSQANESQYPIMRAVVFFSLRIAN--CCLCWFTHTLIALGLSLNSVNLGGNKYTNFMLNGF 415
            |.|..:..|...:.|...|...::||..  ..:.|.|.::...||||::.||.||.|.|..|...
  Rat   320 NLQDGNAKNTQSHHIYDLVRTRNIRILTIMSIILWLTISVGYFGLSLDTPNLNGNIYVNGFLLAA 384

  Fly   416 IQIPGLLLPLVIMDRVGRRHSLCASMLLCAICMGASAAVPADNYAGSLALFLIGKLAITCSFQIL 480
            :::|..:|..:::..|.||:|:..|:.|....:.....||:|....|.||.::||..||.::.::
  Rat   385 VEVPAYVLAWLLLQHVTRRYSMAGSLFLGGSVLLILQLVPSDLLYLSTALVMVGKFGITSAYSMV 449

  Fly   481 YFFTSEIFPTNVRNTLLSLCSMVGRIGSMLAPQTPLLAKYYIYAPQILFATFALISGFLTLAFPE 545
            |.:|:|::||.|||..:.:.|...|:||:|:|....|..|..:.|.|:..:..:::..:|..|||
  Rat   450 YVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRHLPYIVMGSLTILTAIITFFFPE 514

  Fly   546 TADKVLPTTIEEARDLNQAKRRSERS 571
            ::...||.||:|.:.:.:.:|.|..|
  Rat   515 SSGVSLPDTIDEMQKVKRIRRVSAMS 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7458NP_649374.1 2A0119 46..554 CDD:273328 156/520 (30%)
MFS 161..544 CDD:119392 120/386 (31%)
LOC303140XP_008765965.1 2A0119 12..523 CDD:273328 156/520 (30%)
MFS 123..513 CDD:119392 120/390 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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