DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7458 and Slc22a12

DIOPT Version :9

Sequence 1:NP_649374.1 Gene:CG7458 / 40441 FlyBaseID:FBgn0037144 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_033229.3 Gene:Slc22a12 / 20521 MGIID:1195269 Length:553 Species:Mus musculus


Alignment Length:548 Identity:145/548 - (26%)
Similarity:249/548 - (45%) Gaps:55/548 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 ILVRIGQFGRYQIINYVLLCVPMLFNAFFSISYVFTASTVVHRCTVPQCDS-------PSSVYEE 98
            :|.|:|..||:|:...|.|..|:|:....::...|:|:...|||.||..|:       |..:..:
Mouse     6 LLDRVGGLGRFQLFQTVALVTPILWVTTQNMLENFSAAVPHHRCWVPLLDNSTSQASIPGDLGPD 70

  Fly    99 DWLGFTIPK------------KNSAWD--DCHRYAANISDAISGYTDPSGQYCLKEYFTITSETC 149
            ..|..:||.            :...|.  :.:..|.|.|||.   |:|.....:.::.|..|   
Mouse    71 VLLAVSIPPGPDQQPHQCLRFRQPQWQLTESNATATNWSDAA---TEPCEDGWVYDHSTFRS--- 129

  Fly   150 GRDFKFRDEEKTISTEFGIYCEDEWKLSMVGTINNVGQFVGIPLGGYFADRYGRRTMLAVAGSVS 214
                       ||.|.:.:.|..:....|..:|...|..||..:.|:.:||:|||.:|..:..:.
Mouse   130 -----------TIVTTWDLVCNSQALRPMAQSIFLAGILVGAAVCGHASDRFGRRRVLTWSYLLV 183

  Fly   215 ALMGVIRSLSSNYSMFLVFEF-LDMAVGSTLFPTAFLLAIELVGPKRRVAAATIITIFYALGEAF 278
            ::.|...:....:.::.:|.| |..||...:..||.|| :|....:......|:..:.::.|:..
Mouse   184 SVSGTAAAFMPTFPLYCLFRFLLASAVAGVMMNTASLL-MEWTSAQGSPLVMTLNALGFSFGQVL 247

  Fly   279 LGFLASQVQHWRWLLRVLYAPAVLQILFLWILPESVRWLLSQGAEEKASNVLRRAARINQRPLPE 343
            .|.:|..|:.||.|...:.||..|..::.|.||||.|||::.|..::....|:|.|.:|:|....
Mouse   248 TGSVAYGVRSWRMLQLAVSAPFFLFFVYSWWLPESARWLITVGKLDQGLQELQRVAAVNRRKAEG 312

  Fly   344 EQLN-DLLTSNRQKLSQANES--------QYPIMRAVVFFSLRIANCCLCWFTHTLIALGLSLNS 399
            :.|. ::|.|..::....:::        ..|.:|.....|:      ||||.......||:|:.
Mouse   313 DTLTMEVLRSAMEEEPSRDKAGASLGTLLHTPGLRHRTIISM------LCWFAFGFTFYGLALDL 371

  Fly   400 VNLGGNKYTNFMLNGFIQIPGLLLPLVIMDRVGRRHSLCASMLLCAICMGASAAVPADNYAGSLA 464
            ..||.|.:....|.|.:..|.....|:::.|:|||....:.::|..:|:.::..||........|
Mouse   372 QALGSNIFLLQALIGIVDFPVKTGSLLLISRLGRRLCQVSFLVLPGLCILSNILVPHGMGVLRSA 436

  Fly   465 LFLIGKLAITCSFQILYFFTSEIFPTNVRNTLLSLCSMVGRIGSMLAPQTPLLAKYYIYAPQILF 529
            |.::|...:..:|..:..|:||:|||.:|.|.:.||.:..|.|:||.|...||..|..:.|.:::
Mouse   437 LAVLGLGCLGGAFTCITIFSSELFPTVIRMTAVGLCQVAARGGAMLGPLVRLLGVYGSWMPLLVY 501

  Fly   530 ATFALISGFLTLAFPETADKVLPTTIEE 557
            ....::||...|..|||.:..||.||::
Mouse   502 GVVPVLSGLAALLLPETKNLPLPDTIQD 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7458NP_649374.1 2A0119 46..554 CDD:273328 141/538 (26%)
MFS 161..544 CDD:119392 106/392 (27%)
Slc22a12NP_033229.3 2A0119 11..526 CDD:273328 141/538 (26%)
MFS 147..516 CDD:119392 102/375 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843318
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.960

Return to query results.
Submit another query.