DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7458 and hmit-1.1

DIOPT Version :9

Sequence 1:NP_649374.1 Gene:CG7458 / 40441 FlyBaseID:FBgn0037144 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_507623.1 Gene:hmit-1.1 / 180205 WormBaseID:WBGene00013073 Length:606 Species:Caenorhabditis elegans


Alignment Length:519 Identity:99/519 - (19%)
Similarity:191/519 - (36%) Gaps:156/519 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 VGIPLGGYFADRYGRRTMLAVAGSVSALMGVIRSLSSNYSMFLVFE-FLDMAVG-STLFPTAFLL 251
            ||..:.|..:|..|||.::..|.::..:..::.:.|.|..|.||.. .|.:|:| :::....:|.
 Worm    80 VGSLMSGTSSDYIGRRKVILGASAIFTIGALVCAASVNKIMLLVGRVLLGIAIGFASMIVPVYLG 144

  Fly   252 AIELVGPKRRVAAATIITIFYA------LGEAFLGFLASQVQHWRWLLRVLYAPAVLQILFLWIL 310
            .......:..:.||..:.|.:.      .|.|| .::......||.:......|:::|.:....|
 Worm   145 ETAPTHVRGMLVAAFALMISFGQVVANITGGAF-SYIDPYNVGWRLMFAFAAVPSIIQFVCFMFL 208

  Fly   311 PESVRWLLSQGAEEKASNVLRRAARINQRPLPEEQLNDLLTSNRQKLSQANESQY---PIMRAVV 372
            ||:.|||...|.|.:...||.:... ..:...|.::.:::..|..: ::.||..:   |::..::
 Worm   209 PETPRWLYENGFETETREVLEKVYN-GDKEWVEYEMAEIIAFNEDQ-AKENEKAHASGPVIWRIL 271

  Fly   373 -----------------FFSLRIANCCLCWFTHTLIALGLSLNSVNLGGNKYTNFMLN--GFIQI 418
                             |..|...|..|.:....:.:.|:|.|...:    :.:.:|:  .||  
 Worm   272 KTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRSSGISNNHTTI----WISVLLSLCNFI-- 330

  Fly   419 PGLLLPLVIMDRVGRRHSL---CASMLLCAICMG---------ASAAVPADNYA----------- 460
             |..:|:.::::||||...   |..::|..:.:|         ::|.:||:.|.           
 Worm   331 -GPFVPMSLIEKVGRRIIFLFSCGLVVLSLVFIGVAFLLVNHDSAATLPANQYGSNFNSSYPDAK 394

  Fly   461 GSLAL----FLI---------------------------------------GKLA---------- 472
            |.:|.    :.:                                       |.:|          
 Worm   395 GCMAYSNCDYCVTTDACGFCHDANTKQGYCLPAGFDNPEVYSSTGSCTNSNGSIANNFKWEKYYC 459

  Fly   473 ---------ITCSFQILYF---FT-------SEIFPTNVRNTLLSLCSMVGRIGSMLAPQTPLLA 518
                     |.|...:|.|   ||       ||.:|...|:|.:::.:....:.::      ::|
 Worm   460 DTKYTLLPIIACGVYLLTFSSGFTSLPWVLNSEFYPMWARSTCVAISTTSNWVFNL------IIA 518

  Fly   519 KYYIYAPQIL--FATFALISGFLTLAF-------PETADKVLPTTIEEARDL--NQAKRRSERS 571
            ..|:...|::  :..|.|.:|...:||       |||..    .:|||...|  |:.:||...|
 Worm   519 LTYLSLTQVIGKYGAFWLYAGLTVIAFIFILFLVPETKG----YSIEEVEMLFMNKKQRREAES 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7458NP_649374.1 2A0119 46..554 CDD:273328 91/498 (18%)
MFS 161..544 CDD:119392 88/488 (18%)
hmit-1.1NP_507623.1 MFS_HMIT_like 31..554 CDD:340918 88/489 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.