DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7458 and oct-1

DIOPT Version :9

Sequence 1:NP_649374.1 Gene:CG7458 / 40441 FlyBaseID:FBgn0037144 Length:572 Species:Drosophila melanogaster
Sequence 2:NP_492617.4 Gene:oct-1 / 172841 WormBaseID:WBGene00003842 Length:585 Species:Caenorhabditis elegans


Alignment Length:570 Identity:156/570 - (27%)
Similarity:259/570 - (45%) Gaps:67/570 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 DAILVRIGQFGRYQIINYVLLCVP-MLFNAFFSISYVFTASTVVHRCTVPQCDSPSSVYEEDWLG 102
            |.:|.::|.:|.|||:.:.::|:| .|.:||.:.:..|......|.|.:|:        .:::|.
 Worm    27 DFVLEQVGNYGTYQIVFFFIICLPTSLPSAFSAFNIPFVVGNPPHTCHIPE--------GKEYLR 83

  Fly   103 FTIPKKNSAWD-DCHRY--------AANISDAISGYTDPSGQYCLKEYFTITSETC--GRDFKFR 156
               |..|.... .|.:|        .|..|..:..|:|           .|:...|  |.|:...
 Worm    84 ---PLTNDTQILSCKQYNETQINVFRAFTSAPVDTYSD-----------RISLVPCQNGWDYDNS 134

  Fly   157 DEEKTISTEFGIYCEDEWKLSMVGTINNVGQFVGIPLGGYFADRYGRRTMLAVAGSVSALMGVIR 221
            ....::.|||.:.|:.:..:.:..|...||.|:|..|.||.||::|||....|..:|..:.|...
 Worm   135 TYLDSLVTEFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRRSFFVILTVLIVCGTAS 199

  Fly   222 SLSSNYSMFLVFEFLDMAVGSTLFPTAFLLAIELVGPKRRVAAATIITIFYALGEAFLGFLASQV 286
            |.:.:...|::..|........||...|::.:|.:|...|:.:..:.::|:....|.||.:|..:
 Worm   200 SFAKDIESFIILRFFTGLAFPALFQIPFIICMEFMGNSGRIFSGLMTSLFFGAAMALLGVVAMFI 264

  Fly   287 QHWRWLLRVLYAPAVLQILFLWILPESVRWLLSQGAEEKASNVLRRAARINQRP-LPEEQLNDLL 350
            :.||.|.....||....|::.:.||||.||.:|.|....|...|::.|::|.:. :..::|.|.:
 Worm   265 RRWRQLTFFCNAPFAFYIIYYFFLPESPRWSVSVGKWADAKKQLKKIAKMNGKSNVDVDELVDSM 329

  Fly   351 TSNRQKLSQANES----------QYPIMRAVVFFSLRIANCCLCWFTHTLIALGLSLNSVNLGGN 405
             .|.|..::..|:          :.|.:|........|      |..:.:|..||:||..||..:
 Worm   330 -KNHQNAAEEKETKRSHNVTDLFKTPNLRRKTLIVTYI------WVMNAIIYNGLTLNVSNLPVD 387

  Fly   406 KYTNFMLNGFIQIPGLLLPLVIMDRVGRRHSLCASMLLCAI-CMGASAAVPADNYAGSLA-LFLI 468
            .|.:|::||.:::||..:...::...|||.:|.|:|::|.| |:  ||....|.|...:| ...|
 Worm   388 DYWSFIINGAVELPGYFVVWPLLQCAGRRWTLAATMIVCGIGCV--SAMFMPDGYPWLVASASFI 450

  Fly   469 GKLAITCSFQILYFFTSEIFPTNVRNTLLSLCSMVGRIGSMLAPQTPLLAKYYIYAPQILFATFA 533
            ||..:...|.::|.|..|::||.||...:.:.|||...|.:|||....|.|.....|.::....|
 Worm   451 GKFGVGSGFAVIYIFAGELYPTVVRAIGMGMSSMVAGSGLLLAPHIVNLGKIVKILPLLIMGLMA 515

  Fly   534 LISGFLTLAFPETADKVLPTTIEEARD-----------LNQAKRRSERSP 572
            |.:|.||...|||....||.|||:|.:           ..||.::.|..|
 Worm   516 LSAGILTFFLPETLGAPLPMTIEDAENFGKKPEPDSGMFTQAAKKRESQP 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7458NP_649374.1 2A0119 46..554 CDD:273328 146/532 (27%)
MFS 161..544 CDD:119392 114/395 (29%)
oct-1NP_492617.4 2A0119 34..536 CDD:273328 146/532 (27%)
MFS 134..526 CDD:119392 114/400 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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