DRSC/TRiP Functional Genomics Resources

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Protein Alignment DNApol-eta and eco

DIOPT Version :9

Sequence 1:NP_649371.2 Gene:DNApol-eta / 40438 FlyBaseID:FBgn0037141 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_648106.1 Gene:eco / 38812 FlyBaseID:FBgn0035766 Length:1052 Species:Drosophila melanogaster


Alignment Length:494 Identity:96/494 - (19%)
Similarity:151/494 - (30%) Gaps:165/494 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   459 QEMFANQAAKKRRVSGDEPGQLPKVEMEKKQKQTDEFKMKSFFANYLQGAKKEDAKADGISANPL 523
            :::|.:..::.|:::.||                                  :||..|.:...||
  Fly    23 RQLFGSPRSRLRQINDDE----------------------------------DDADVDSLGVLPL 53

  Fly   524 AAAAGAPNKNFVEEYKHKLHAAV-------------------RTEGTVLTSTPAEFKESFFS--- 566
            .....|..|.      ..|.|||                   :|.|.|:|:|..:..:.|.:   
  Fly    54 KTHVAANRKG------RSLFAAVPGKSSSSANSSPETNKENKKTRGGVMTATAEQLPQLFTATMR 112

  Fly   567 ---------------QYLKQQKKT-GQQGSVTSREDSLDVQELAEELDAIEADNSKDFEEDTEEE 615
                           |...|:|:. ....|.||..:..........:.......|...:.|....
  Fly   113 LNSNSSSNSRNSSPRQTRVQRKRADSSMSSPTSSSEGTPSSRARNSIRRSPRTFSAQKDPDAFSS 177

  Fly   616 TELTSDTHMSK-----PEGQSSDAGQEQDPNTLNDSTGNDLYVETGIVPPTLT-------EDELK 668
            .| :..|.:||     .:||.|.:..|:.....|.|......|.|  ..|..|       .|:.|
  Fly   178 PE-SFQTRLSKVAAMLMKGQDSRSMLEKSKKKHNHSLKTTAQVHT--TKPKKTSPAEESQSDDEK 239

  Fly   669 PSTSK--RKFDEIESSVSNYKECYVEFAVPNLRTDILPTIKCD-QCGANIPDEVKSLQTHRDHHF 730
            ||:||  ||..|:..:.|:      :...|..|....|....| .|        |:|:.      
  Fly   240 PSSSKNSRKNTEVRETRSS------QIISPKTRNRRRPFTSADINC--------KTLKA------ 284

  Fly   731 AQELSRTLRSTERE-------ERTQSRQKISLKPTPPKKSKKTA---GSGSSSYSTAPPSNSITK 785
            |..|...:||.:.|       |.::||.|   .|....||...|   .:|:::..||..|...| 
  Fly   285 AAHLHENMRSYDEEKTAAVKLENSRSRSK---SPVEVFKSNDDAVKRNTGNTNNKTAKSSEVAT- 345

  Fly   786 FFRAKPTQEQAPSDPQMNQCPECKAFIKCVDMPEHLDYHVARNLQRELNQQDLRTRTAALNKEKI 850
                    .:.|..|..:.    |..::..:..|....|..:..|               :.|..
  Fly   346 --------AKRPESPGSSM----KIDVEVPESDEEASNHKPQKRQ---------------HPETS 383

  Fly   851 SPVQPKKQS-----QKKLNSTISASSSGTKTIAQFFSQS 884
            :||.|...:     |.|:.....:||..|..   |:|.|
  Fly   384 TPVAPSADADSGSPQSKMRKVTLSSSIPTMA---FYSHS 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNApol-etaNP_649371.2 PolY_Pol_eta 20..447 CDD:176456
zf_UBZ 705..736 CDD:408236 6/31 (19%)
zf_UBZ 805..832 CDD:408236 4/26 (15%)
ecoNP_648106.1 zf-C2H2_3 839..878 CDD:290589
NAT_SF 945..>1008 CDD:173926
Acetyltransf_13 982..1043 CDD:290591
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452757
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4551
SonicParanoid 00.000 Not matched by this tool.
21.960

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