DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DNApol-eta and Rev1

DIOPT Version :9

Sequence 1:NP_649371.2 Gene:DNApol-eta / 40438 FlyBaseID:FBgn0037141 Length:885 Species:Drosophila melanogaster
Sequence 2:XP_038939500.1 Gene:Rev1 / 316344 RGDID:1306715 Length:1249 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DNApol-etaNP_649371.2 PolY_Pol_eta 20..447 CDD:176456
zf_UBZ 705..736 CDD:408236
zf_UBZ 805..832 CDD:408236
Rev1XP_038939500.1 BRCT_Rev1 63..146 CDD:349351
PolY_Rev1 361..837 CDD:176455
Rev1_UBM2 942..975 CDD:412037
Rev1_UBM2 1019..1054 CDD:412037
Rev1_C 1155..1248 CDD:213388
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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