DRSC/TRiP Functional Genomics Resources

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Protein Alignment PolH and POLI

DIOPT Version :10

Sequence 1:NP_649371.2 Gene:PolH / 40438 FlyBaseID:FBgn0037141 Length:885 Species:Drosophila melanogaster
Sequence 2:NP_009126.2 Gene:POLI / 11201 HGNCID:9182 Length:740 Species:Homo sapiens


Alignment Length:865 Identity:195/865 - (22%)
Similarity:322/865 - (37%) Gaps:256/865 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NKYDRVVLLVDMDCFFCQVEEKQHPEYRNRPLAVVQ-YNPWRGGGIIAVNYAARAKGVTRHMRGD 75
            |...||::.||:|||:.|||...:||.:::||.|.| |.      ::..||.||..||.:.|...
Human    49 NASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYL------VVTCNYEARKLGVKKLMNVR 107

  Fly    76 EAKDLCPEIVLCQVPNIREKADTSKYRDAGKEVANVLQRFTQLLERASVDEAYLDITETVNHRMQ 140
            :||:.||::||.      ...|.::||:...:|..:|:.|:.::||...||.::|:||.|..|:|
Human   108 DAKEKCPQLVLV------NGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQ 166

  Fly   141 QMQSGAFALQPQELVNTFAVGYPSIGDYVNKITNRFANPYMDDERYQMSYDQNDLPAVRQSDIRL 205
            |:||       .||......|:                          .|:...:..:....|||
Human   167 QLQS-------DELSAVTVSGH--------------------------VYNNQSINLLDVLHIRL 198

  Fly   206 LIGASVAGEVRAAVKKETGYECSAGIAHNKILAKLAAGMNKPNKQTILPLTETASLFDSL-PVGK 269
            |:|:.:|.|:|.|:..:.|....||:|.||:||||.:|:.|||:||:|.......|..|| .:.:
Human   199 LVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKE 263

  Fly   270 IKGLGGKFGEVVCETLGIKFMGQVVKFSEVDLQRKFDEKNGTWLFNISRGIDLEAV----TPRFY 330
            |.|:|.|..:.: |.|||..:..:..||...|:::........:..:|.|.|...|    .|:.:
Human   264 IPGIGYKTAKCL-EALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSF 327

  Fly   331 SKSIG---CCKKFPGRNNITGLKTLQHWLGELSSEINDRLEKDFIENNRRAKHMVVQYVQDIDGE 392
            |:...   |..:...:|.|.          ||.:.:.:|:.:|     .|..|.|          
Human   328 SEEDSFKKCSSEVEAKNKIE----------ELLASLLNRVCQD-----GRKPHTV---------- 367

  Fly   393 EVASSRSTALRDYDQESIVRLSLDLIKANTKTFLRPGSESAL-NNAIKFLGISVGKFETVSSGQN 456
                  ...:|.|..|              |.:.|...:..: ::.|:.||  .|.::.::...:
Human   368 ------RLIIRRYSSE--------------KHYGRESRQCPIPSHVIQKLG--TGNYDVMTPMVD 410

  Fly   457 KLQEMFANQAAKKRRVSGDEPGQLPKVEMEKKQKQTDEFKMKSFFANY--LQGAKKEDAKADGIS 519
            .|.::|.|....|.      |..|..:.:              .|.|.  |..|||      |:.
Human   411 ILMKLFRNMVNVKM------PFHLTLLSV--------------CFCNLKALNTAKK------GLI 449

  Fly   520 ANPLAAAAGAPNKNFVEEYKHKLHAAVRTEGTVLTSTPAEFKESFFSQYLKQQK------KTGQQ 578
            ...|..:....:::....:|                    .|::....:.|.::      .:|:.
Human   450 DYYLMPSLSTTSRSGKHSFK--------------------MKDTHMEDFPKDKETNRDFLPSGRI 494

  Fly   579 GSVTSREDSLDVQELAEELDAIEADNSKDFEEDTEEETELTSDTHMSKPEGQSSDAGQEQDPNTL 643
            .|..:||..||....::|         ||..|          ....|.|||...:..::.     
Human   495 ESTRTRESPLDTTNFSKE---------KDINE----------FPLCSLPEGVDQEVFKQL----- 535

  Fly   644 NDSTGNDLYVETGIVPPTLTEDELKPSTSKRKFDEIESSVSNYKECYVEFAVPNLRTDILPTIKC 708
                            |...::|:....|:.|| :.:.|||                        
Human   536 ----------------PVDIQEEILSGKSREKF-QGKGSVS------------------------ 559

  Fly   709 DQCGANIPDEVKSLQTHRDHHFAQELSRTLRSTEREERTQSRQKISLKPTPPKKSKKTAG--SGS 771
              |..:....|.|.       |:::..:.:....|:..:.|:|..|:.|..|    .|:|  |.|
Human   560 --CPLHASRGVLSF-------FSKKQMQDIPINPRDHLSSSKQVSSVSPCEP----GTSGFNSSS 611

  Fly   772 SSYSTAPPSNSITKFFRAKPTQ-EQAPSDPQ----MNQCPECKAFIKCVDMPEHLDYHVARNLQR 831
            |||.::....|.....|.|..: .|.|.:||    .|..|...||            |...|||.
Human   612 SSYMSSQKDYSYYLDNRLKDERISQGPKEPQGFHFTNSNPAVSAF------------HSFPNLQS 664

  Fly   832 ELNQQDLRTRTAALNKEKIS 851
            |  |...|..|...:|:.::
Human   665 E--QLFSRNHTTDSHKQTVA 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PolHNP_649371.2 PolY_Pol_eta 20..447 CDD:176456 115/436 (26%)
zf_UBZ 705..736 CDD:465769 4/30 (13%)
zf_UBZ 805..832 CDD:465769 7/26 (27%)
POLINP_009126.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
PolY_Pol_iota 56..437 CDD:176457 123/493 (25%)
DNA-binding. /evidence=ECO:0000269|PubMed:15254543, ECO:0000269|PubMed:27555320, ECO:0007744|PDB:1T3N, ECO:0007744|PDB:5KT2, ECO:0007744|PDB:5KT4, ECO:0007744|PDB:5KT6 249..314 16/65 (25%)
DNA-binding. /evidence=ECO:0000269|PubMed:15254543, ECO:0000269|PubMed:27555320, ECO:0007744|PDB:1T3N, ECO:0007744|PDB:5KT2, ECO:0007744|PDB:5KT4, ECO:0007744|PDB:5KT6 325..439 28/180 (16%)
Ubiquitin-binding 1 (UBM1). /evidence=ECO:0000250|UniProtKB:Q6R3M4 527..544 2/37 (5%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 581..615 12/37 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 671..704 2/12 (17%)
Rev1_UBM2 <705..730 CDD:412037
Ubiquitin-binding 2 (UBM2). /evidence=ECO:0000250|UniProtKB:Q6R3M4 708..725
Blue background indicates that the domain is not in the aligned region.

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